Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., putative peptidoglycan synthetase from Phaeobacter inhibens DSM 17395

 Score =  202 bits (515), Expect = 2e-56
 Identities = 159/571 (27%), Positives = 265/571 (46%), Gaps = 65/571 (11%)

Query: 29  RFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNGEAL 88
           R  +L  F L AF A+ AR+A +   EP   I      S     +   R  I DR G  L
Sbjct: 48  RLLVLGMFFLCAFTAIGARMATLATSEPVEPIA-----SAPGSAIAMQRADIVDRKGRIL 102

Query: 89  AVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIED-NRSRRFIYLQR 147
           A +    +++A P  +    G  ++     L ++      E+ + + D    R+FI++++
Sbjct: 103 ATNFETHSLYAQPPQMVDPEGAAQR-----LVEIF--PDLELERLVGDFTGKRKFIWIKK 155

Query: 148 QVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVGVTGIDGHGLE--------GVE 199
           ++SP   + + ++   G+       R YP G V+AH++G  G    G+         GVE
Sbjct: 156 KISPEQKQAVHDIGDPGLLFGPREMRLYPNGSVAAHVLGGAGFGKEGVSAAEVIGVAGVE 215

Query: 200 RSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTIDQRLQAIAFRAVKQAMA 259
           + FD  L                       +    G+P+QL++D  +QA + R +   M 
Sbjct: 216 KQFDDYLR----------------------DPANGGRPLQLSLDLTVQAASERVLLGGMK 253

Query: 260 DYRATSASAVMLDVKTGAVLAMVNAPSYNPNNRN-------DWQSFKMRNRVITDAFEPG 312
              A  A+++++DV TG V+++V+ P ++PN+R        D  +  + NR +   +E G
Sbjct: 254 LMNAKGATSILMDVHTGEVISVVSLPDFDPNDRPRPPTSGFDPSTSPLFNRAVQGVYELG 313

Query: 313 STVKPFVVLAALANGIADKNTIIDTGDGTMQIGGSRVRD--TSKVGKADLTLILKKSSNI 370
           ST K F    A+  GI +  TIIDT  G M+IG   + +      GK  +  I+  SSN 
Sbjct: 314 STFKIFTAAQAVDLGIVNSETIIDTS-GPMRIGRFPIGEFHNKNYGKLSVADIIVNSSNR 372

Query: 371 GVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIFPNRRRWSQFEIATLSFGYGLA 430
           G  +LAL++  +       ++G+ E + +++     G     R+W +    T+S+G+GL+
Sbjct: 373 GTGRLALQIGAQRQQDFLRAMGMFEPTPIEIAEAAGGKPLKPRKWGELSTVTISYGHGLS 432

Query: 431 ITPIQLAHAYATLGNHGKYQPIHII--KGDQHGETRQVVDPKYVNQVLEMLETVTQPGGT 488
            +P+ LA  YA + N G+Y    I+  KG Q G   +++ P+   Q   ML  V    GT
Sbjct: 433 TSPMHLAAGYAAIANGGQYVAPTILRQKGPQLG--HRIMSPEAAGQARAMLRKVV-TSGT 489

Query: 489 ATRAAVPGYRIAAKSGTS--RKAIAGGYSDEYFAYTAGVAPVSDPRISLVVMVNEPQ--- 543
           A+   VPGY++  K+GT+   K   G Y  +  A  A + P  DP+  LVV ++EP    
Sbjct: 490 ASFGEVPGYQVGGKTGTADKPKPRGGYYESKVIATFAAMFPAHDPKYVLVVTLDEPSVIA 549

Query: 544 --GDSYYGGAVAGPVFSEIMKGALQILNIAP 572
              +    G  A PV  E++     +L + P
Sbjct: 550 HGEERRTAGWTAVPVAGEMIGRVAPLLGLRP 580