Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., penicillin-binding protein 2 from Dechlorosoma suillum PS

 Score =  174 bits (440), Expect = 1e-47
 Identities = 155/601 (25%), Positives = 266/601 (44%), Gaps = 84/601 (13%)

Query: 27  RWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNGE 86
           R+R       VL  F  L AR  ++Q+++ D      +   I    +   RG+I DRNG 
Sbjct: 17  RFRLGFAAGMVLLCFVILFARFFWLQVVKHDYYSTRAEENRISLVPIIPNRGLIVDRNGV 76

Query: 87  ALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIEDNRSRRFIYLQ 146
            +A +     +   P  + ++   V  ++   L  +   DR+   K +E++++   I ++
Sbjct: 77  VMARNYSAFTLEITPSRLQEDLETVI-EQIGTLIPITPKDRKRFKKLMEESKNFESIPIR 135

Query: 147 RQVSP-AMAKYI-RELKLAGIGLKEESRRYYPAGEVSAHLVGVTG---------IDGH-- 193
            ++S   +A++     +  G+ +K    R YP G+V++H +G  G         ID    
Sbjct: 136 TRLSDDEVARFAANRYRFPGVEVKARLFRQYPLGDVASHALGYMGRINDKDLETIDNAEQ 195

Query: 194 ----------GLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTID 243
                     G  G+E++++  L GE+G      D  GR V  ++      G  + LT+D
Sbjct: 196 TPNYKGTEHIGKAGLEQNYEFQLHGETGYEEVEVDAGGRAVRVLSRTAPVSGNNLSLTLD 255

Query: 244 QRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPN------NRNDWQS 297
            +LQ I  +A       + +   + V ++  TG +LA+V+ P+Y+PN        +DW  
Sbjct: 256 SKLQEITEQA-------FGSRRGALVAIEPSTGGILALVSKPTYDPNLFVDGIRGDDWDG 308

Query: 298 FK------MRNRVITDAFEPGSTVKPFVVLAALANGIADKNTIIDTGDGTMQIGGSRVRD 351
                   + NR I  A+ PGST KPF+ LAAL  G    +  I    G    GG + RD
Sbjct: 309 LNTDPDKPLLNRAIYSAYPPGSTFKPFMALAALVQGKRTPSQAI-ADPGYFNFGGHQFRD 367

Query: 352 TSK--VGKADLTLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIF 409
             K   G  D+   + +S +     LA +M ++ +      +GLG+ +G+D+ GE+ G+ 
Sbjct: 368 DKKGGHGMVDMYKSIVESCDTYYYILANDMGIDNIAAFMGQLGLGQRTGVDIQGESEGVL 427

Query: 410 PNR------------RRWSQFEIATLSFGYGL-AITPIQLAHAYATLGNHGKYQPIHIIK 456
           P++            ++W   E  ++  G G  A TPIQLA A AT+ N G     H++K
Sbjct: 428 PSQAWKKRRFKKPEHQKWYAGETISIGIGQGYNAYTPIQLAQAVATIANDGVMYRPHLVK 487

Query: 457 ---GDQHGETRQV---------VDPKYVNQVLEMLETVTQPGGTATRAAVPGYRIAAKSG 504
                + GE   V         + P+++  +   +  V + G  A   A  GY  A K+G
Sbjct: 488 YITNSRSGEKTMVEPQPIRDLKLKPEHLAVIKNAMVGVNKAGTGARAFAGAGYESAGKTG 547

Query: 505 TSR-------KAIAGGYSDEYFAYTAGV--APVSDPRISLVVMVNEPQGDSYYGGAVAGP 555
           T++       K + G        ++  +  AP   P+I+L V+V     +  +G A A P
Sbjct: 548 TAQVFSLKGEKYVEGATKHHLRDHSLFIAYAPAEQPKIALAVIVE----NGGFGAAAAAP 603

Query: 556 V 556
           +
Sbjct: 604 I 604