Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., penicillin-binding protein 2 from Klebsiella michiganensis M5al

 Score =  160 bits (404), Expect = 2e-43
 Identities = 165/612 (26%), Positives = 270/612 (44%), Gaps = 91/612 (14%)

Query: 24  IFIRWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDR 83
           +FIR R  +    V+  F  L+  +  +Q+ + D      +   I+   +  +RG+I DR
Sbjct: 17  LFIR-RAVIAFLLVVVCFAILILNLYRLQVDQHDFYQTRSNQNDIKMLPIAPSRGLIFDR 75

Query: 84  NGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIEDNRSRRFI 143
           NG  L  ++ +  +   P  I     L+++     + D+   D  +    +  N   + +
Sbjct: 76  NGIPLVQNITLYRLQVIPSKIADMTALLQQ--LTPIVDLTPQDIADFRDDMHHNSRYKEV 133

Query: 144 YLQRQVSPA-MAKY-IRELKLAGIGLKEESRRYYPAGEVSAHLVG-VTGIDGH------- 193
            L+  +S   +A++ + E    G+ ++   +R YP G   AH+VG V+ I+         
Sbjct: 134 TLKADLSDVEVARFAVNEFHFPGVTVESYQQRAYPYGAELAHVVGYVSKINNSDLQKLAK 193

Query: 194 -------------GLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQL 240
                        G +G+E  ++  L G +G      D  GRVV  +       GK I L
Sbjct: 194 AGEEENYAADHNIGKQGIEGYYEKALHGTTGYQEVEVDNHGRVVRLLKEVPPVAGKNIYL 253

Query: 241 TIDQRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPN---NRNDWQS 297
           T+D  LQ      +K          A+ V +D + G VLAMV++PSY+PN       +Q+
Sbjct: 254 TLDLHLQQYIESVLK-------GQRAAVVAVDPRDGGVLAMVSSPSYDPNPFVRGIGYQA 306

Query: 298 FK---------MRNRVITDAFEPGSTVKPFVVLAALANGIADKNTIIDTGDGTMQIGGS- 347
           ++         + NRV    + P STVKP++ L+AL+ G+    T    G  T  + G+ 
Sbjct: 307 YRSLLDNPDRPLINRVTQGLYPPASTVKPYMALSALSAGVITPTTSF-FGAPTWTLPGTQ 365

Query: 348 -RVRDTSKVGKA--DLTLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGE 404
            R RD  K G    ++T  +++S++    ++A EM ++ +    S  G G+ +G+DL  E
Sbjct: 366 RRYRDWLKSGHGMLNVTKAIEESADTFFYQVAFEMGIDRIHEWLSKFGYGQSTGIDLNEE 425

Query: 405 TIGIFPNR--------RRWSQFEIATLSFGYGLAI-TPIQLAHAYATLGNHGKYQPIHII 455
             G+ P+R        + W Q +  ++  G G  I TPIQ+  A  TL N+GK Q  H++
Sbjct: 426 YAGVLPSREWKQRVHKKPWYQGDTISVGIGQGYWIATPIQMVKALTTLINNGKVQNPHLL 485

Query: 456 KGDQHG----------ETRQVVDPK--YVNQVLE-MLETVTQPGGTATRA-AVPGYRIAA 501
              + G          +  QV DP+  Y   V   M      P GT  +      Y+IAA
Sbjct: 486 YSMKQGNKVERYQPPQDLPQVGDPRSPYWGVVRNGMYGMANLPNGTGYKLFHTAPYQIAA 545

Query: 502 KSGTSR------------KAIAGGYSDEYFAYTAGVAPVSDPRISLVVMVNEPQGDSYYG 549
           KSGTS+            K I     D  F YT   AP   P++++ +++    GD    
Sbjct: 546 KSGTSQVFSLKENQTYNAKMIPVRLRDHIF-YTL-FAPYQHPKVAMALILENGGGD---- 599

Query: 550 GAVAGPVFSEIM 561
           G VAGP    I+
Sbjct: 600 GVVAGPTARAIL 611