Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., penicillin-binding protein 2 from Klebsiella michiganensis M5al

 Score =  150 bits (380), Expect = 1e-40
 Identities = 163/623 (26%), Positives = 273/623 (43%), Gaps = 100/623 (16%)

Query: 18  TAEPAPIFIRWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSAR 77
           TAE + +F+R R  +    +L     L+A +  +QI+   +     +   I+   +  +R
Sbjct: 11  TAESS-LFVR-RALVAFLGILLLTGVLIANLYNVQIVRYTDYQTRSNENRIKLVPIPPSR 68

Query: 78  GIISDRNGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMK-KIED 136
           GII DRNG  LA++  +  +   P  +      ++     AL DV+ L   ++   K E 
Sbjct: 69  GIIYDRNGTPLALNRTIYQLEMMPEKVDNVQQTLD-----ALRDVIDLTDDDVANFKKER 123

Query: 137 NRSRRFIYLQRQVSPAMAKYIR----ELKLAGIGLKEESRRYYPAGEVSAHLVG------ 186
            RS RF  +  +V+ +  +  R    + +  G+ +K   RRYYP      H++G      
Sbjct: 124 ARSHRFTSIPVKVNLSEVQVARFAVNQYRFPGVEVKGYKRRYYPYNSALTHVIGYVSKIN 183

Query: 187 ---VTGIDGHGLE------------GVERSFDSTLTGESGKSVTRKDKFGRVVENIALEE 231
              V  +D  G              G+ER ++  L G++G      +  GRV+  +    
Sbjct: 184 DKDVDRLDKEGKLANYASTHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVP 243

Query: 232 REEGKPIQLTIDQRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNN 291
            + G+ I LT+D +LQ    + ++  +A  RA   + V+ D +TGA+LA+V+ PSY+PN 
Sbjct: 244 PQAGRDIYLTLDLKLQ----QYIETLLAGSRA---AVVVTDPRTGAILALVSTPSYDPNL 296

Query: 292 RNDWQSFK------------MRNRVITDAFEPGSTVKPFVVLAALANGIADKNT-IIDTG 338
             D  S K            + NR     + P STVKP+V ++AL+ G+  +NT + D G
Sbjct: 297 FVDGISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTSLFDPG 356

Query: 339 DGTMQIGGSRVRDTSKVGKADL--TLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEM 396
              +     R RD  K G   L  T  L++S++    ++A +M ++ L       G G  
Sbjct: 357 WWQLPGSDKRYRDWKKWGHGHLNVTKALEESADTYFYQVAYDMGIDRLSEWMGKFGYGHY 416

Query: 397 SGLDLVGETIGIFPNR--------RRWSQFEIATLSFGYGL-AITPIQLAHAYATLGNHG 447
           +G+DL  E  G  P R        + W Q +   +  G G    TPIQ+  A   L N G
Sbjct: 417 TGVDLAEERSGNMPTREWKLKRFKKPWYQGDTIPVGIGQGYWTATPIQMNKALMILINDG 476

Query: 448 KYQPIHIIKGD-QHGETRQVVDPKY--VNQVLEMLETVTQPG--GTATRA--------AV 494
             +  H+++   + G+    V P    V  +      + + G  G A R         A 
Sbjct: 477 VVKVPHLLQSTVEDGKPVPWVQPHEPPVGDIHSGFWEIAKDGMFGVANRGNGTAHKYFAS 536

Query: 495 PGYRIAAKSGTSRKAIAGGYSDEYF------------AYTAGVAPVSDPRISLVVMVNEP 542
             Y+IAAKSGT++  + G  ++E +                  AP ++P++++ +++   
Sbjct: 537 APYKIAAKSGTAQ--VFGLKANETYNAHRIAERLRDHKLMTAFAPYNNPQVAVAIILEN- 593

Query: 543 QGDSYYGGAVAGPVFSEIMKGAL 565
                 GG  AGP    IM+  L
Sbjct: 594 ------GG--AGPAVGTIMRQIL 608