Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas syringae pv. syringae B728a

 Score =  362 bits (929), Expect = e-104
 Identities = 205/470 (43%), Positives = 281/470 (59%), Gaps = 11/470 (2%)

Query: 43  VITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRA 102
           +I  L LDSR ++ GD F+A+ G  VDGR  I  A+ +GA  V  E     +    +   
Sbjct: 17  LIRELTLDSRNVRPGDLFLAVPGIKVDGRAHIADALKRGAAAVAYEVAGSTVLPITD--- 73

Query: 103 GVPVIYLAELGQHLSELAGRLYGGHHNQL--IGVTGTNGKTTITQLIAQWLELLGHKAAV 160
            VP+I +  L   LS +AGR YG     L  +GVTGTNGKT++TQL+AQ L++LG +  +
Sbjct: 74  -VPLIPVKGLAGQLSAIAGRFYGDPSRSLNLVGVTGTNGKTSVTQLVAQALDVLGQRCGI 132

Query: 161 MGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFV 220
           +GT G GF  +L+   +TT + + +QATL DL + GA+  A+E SSHGL QGR   L F 
Sbjct: 133 VGTLGTGFYGSLQSGRHTTPDPIAVQATLTDLRKAGARAVAMEVSSHGLDQGRATALAFD 192

Query: 221 AGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDDAVGAQW--VKQLPQAIG 278
             V +NLSRDHLDYHGTMEAYAAAK  LF+    +  +IN+DD  G +   VKQ  + I 
Sbjct: 193 VAVLTNLSRDHLDYHGTMEAYAAAKAKLFAWSDLKCRVINLDDDFGRELAAVKQESRLIT 252

Query: 279 VSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLS 338
            S +   +++  ++ R+  + + G+     +  GE  L + L+G FN  N+L A+  LL 
Sbjct: 253 YSQL---DSSAYLYCRDAKFDDDGVRATLVTPQGEHFLRSSLLGRFNLSNVLAAVGALLG 309

Query: 339 LGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAHTPDALEKALRALRVHCAGQLW 398
           L +    +L   PKL   +GRM+      K  +VVDYAHTPDALEK L ALR H  G+L 
Sbjct: 310 LDYALDEILKALPKLEGPVGRMQRLGGADKPLVVVDYAHTPDALEKVLEALRPHAKGRLL 369

Query: 399 AIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPERAHIE 458
            + GCGGDRDRGKRP+MA + E+ AD V +TDDNPRSESP +I  D+  G    ++    
Sbjct: 370 CLFGCGGDRDRGKRPLMAGVVERLADGVWVTDDNPRSESPVSIFDDIRPGFVAADKVRFI 429

Query: 459 HHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQQLL 508
             R QA +  +  A A D+++LAGKGHEDYQ +  +   +SD + A   L
Sbjct: 430 EGRGQAIAELIASANADDVVVLAGKGHEDYQEINGQRQPFSDLQEAASAL 479