Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas syringae pv. syringae B728a

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 83/346 (23%), Positives = 144/346 (41%), Gaps = 31/346 (8%)

Query: 50  DSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAGVPVIYL 109
           DSR I+ G  FVA+ G   DG +++D+  A+GA   L E + Q         A +P + +
Sbjct: 31  DSRGIEPGQLFVALTGPRFDGHEYLDQVAAKGAVGALVEREVQ--------GAALPQLVV 82

Query: 110 AELGQHLSELAGRLYGGHHNQ-LIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGF 168
            +  + L++L         ++ +  VTG++GKTT+ +++A    +L  +  V+ T GN  
Sbjct: 83  LDTRKALAQLGAMNRNAFVDRPVAAVTGSSGKTTVKEMLA---SILRTRGPVLATRGN-- 137

Query: 169 LNALEPAANTTGNALQIQATLRDLA-ERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNL 227
                       N L +  TL +LA E  +    L  S  G +   V        + +N 
Sbjct: 138 ----------LNNELGVPLTLLELAPEYTSAVIELGASRVGEIAYTVSLAKPHVAMITNA 187

Query: 228 SRDHLDYHGTMEAYAAAKFSLFSE-HACQNAIINVDDAVGAQWVKQLPQAIGVSLVTKPN 286
              H+   G  +    AK  +     A   A++N++D     W K+      +      +
Sbjct: 188 GTAHVGEFGGPDRIVEAKGEILEGLDAGGTAVLNLEDKAFPIWRKRAGNR-NILTFALTD 246

Query: 287 TAQAIWAREVAYAESGI-TLNFESSWGEGELHAPLIGEFNACNLLLALATLLSLGFEKSA 345
           +A  ++A E++    G    N  S  G   +   L+G  N  N L A A   ++G     
Sbjct: 247 SAADVYASELSRDARGCPAFNLNSPLGTARVQLNLLGTHNVSNALAAAAAGCAMGVPLEG 306

Query: 346 LLATAPKLRPVLGRMELFQREQKAKMVVD--YAHTPDALEKALRAL 389
           ++     ++PV GR  + Q       V+D  Y   P ++  A+  L
Sbjct: 307 IVTGLNNVQPVKGR-AVAQIASNGTRVIDDTYNANPASINAAVDIL 351