Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Synechococcus elongatus PCC 7942

 Score = 64.3 bits (155), Expect = 9e-15
 Identities = 87/322 (27%), Positives = 133/322 (41%), Gaps = 52/322 (16%)

Query: 47  LELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAGVPV 106
           L  DSR I+ GD F+A++G   DG  F+ +A+A GA   + + D Q  +   +  AG   
Sbjct: 32  LTTDSRQIQPGDIFLALRGDRFDGHDFVAQALADGAIAAIVDRDYQPPS---DLAAG--- 85

Query: 107 IYLAELGQHL---SELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGT 163
            +L ++   L    E+A          LIG+TG+ GKTT  +LIA  L + G    V+ T
Sbjct: 86  -HLLQVDNTLWAYQEVARLWRQRCSLPLIGITGSVGKTTTKELIAAMLAVRG---PVLKT 141

Query: 164 TGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVA-- 221
             N              N + +  T+  +         LE    G  +G++ +L  +A  
Sbjct: 142 EAN------------YNNEIGVPKTVLQIDPDHHWAAVLEMGMRG--RGQIAELARIAQP 187

Query: 222 --GVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQN-AIINVDD--AVGAQWVKQLPQA 276
              V +N+   H+   G+ +A A AK  L ++ +    AI+N D+   +       LP+ 
Sbjct: 188 NIAVITNVGTAHIGLLGSEQAIAEAKCELLAQLSGTGLAILNADNHRLIATAQRLNLPRC 247

Query: 277 IGVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGE-LHAPLIGEFNACNLLLALAT 335
               L       Q I              + E+   EG+    PL G  NA N L  LA 
Sbjct: 248 RTYGLQNGDLQGQLI--------------DLETLVVEGQRFRLPLPGAHNALNFLAGLAI 293

Query: 336 LLSLGFEKSA---LLATAPKLR 354
              LG +  A   L  T P+ R
Sbjct: 294 AQELGLDWEAFRDLSVTLPQGR 315