Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., UDP-N-acetylmuramate--L-alanine ligase from Synechococcus elongatus PCC 7942

 Score = 71.6 bits (174), Expect = 6e-17
 Identities = 127/469 (27%), Positives = 181/469 (38%), Gaps = 83/469 (17%)

Query: 67  AVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRA----GVPVIYLAELGQHLSELAGR 122
           A    +F  +A++ G +  +  + A H +   EY+A    G PV + ++L   L+ L  R
Sbjct: 62  AATNLEFFQEAVSAGQSPQVICSTAIHAHN-EEYQAAIDLGCPVFHRSDL---LAALL-R 116

Query: 123 LYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNA 182
           +Y     + I V GT+GKTT + LIA  L   G    V+     G +NAL       GNA
Sbjct: 117 VY-----ESIAVAGTHGKTTTSGLIAYLLYQAGLDPTVVI---GGEVNALG------GNA 162

Query: 183 LQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYA 242
              Q         G    A    S     G + KL    G+ +N+  DH D++  +EA  
Sbjct: 163 RLGQ---------GRHLVAEADES----DGSLVKLQAAIGIITNIELDHPDHYCDLEAVI 209

Query: 243 AAKFSLFSEHACQNAIINVDDAVGAQWVKQLPQAIGVSLVTKPNTAQAIWAREVAYAESG 302
           +  F  FS++ C   I N D         +LP  I  SL   P         +V++  SG
Sbjct: 210 ST-FKTFSDN-CSQLIANWDCPTVRD---RLPGTISYSL--DPARGADYTVDQVSFRGSG 262

Query: 303 ITLNFESSWGEGEL----HAPLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLG 358
                   W  GEL    H PL+   N  N L A+A    LG + +++            
Sbjct: 263 TQARI---WERGELLGRIHLPLLEAHNLSNALAAIAACRHLGMDFASIREGLAGFEGARR 319

Query: 359 RMELFQREQKAKMVVDYAHTPDALEKALRALRVHCAGQLWAIVGCGGDRDRGKR------ 412
           R E     Q  + V DYAH P  L   L A R+          GC    +  KR      
Sbjct: 320 RFEFRGSAQGIQFVDDYAHHPSELAATLAAARLQIDS------GCSRLPEVPKRLVAIFQ 373

Query: 413 --------PMMAAIAEQF--ADRVILTD------DNPRSESPQAIVADMVAGLTYPERAH 456
                     +A  A+ F  AD V+++D       NP   S Q + AD +A   Y    H
Sbjct: 374 PHRYSRTQAFLAEFAQSFGPADLVLISDIYAAGERNPGQLSGQTL-ADAIA--QYQANVH 430

Query: 457 IEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYS-DRETA 504
                        Q     D+ L  G G+ + QV+     HY+ DR  A
Sbjct: 431 YAPDLEAVEQRLHQLLQPGDLALFLGAGNLN-QVIPRLLDHYACDRSAA 478