Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase from Sinorhizobium meliloti 1021

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 82/320 (25%), Positives = 133/320 (41%), Gaps = 24/320 (7%)

Query: 44  ITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGAN-LVLAEADAQHLNGWVEYRA 102
           IT + +DSR I  G+ F AI+G  VDG  +   A+A GA  LV++EA    L      R 
Sbjct: 26  ITGISIDSRTIGDGEAFFAIRGDRVDGHDYAGIALANGAALLVVSEAKLPALG-----RL 80

Query: 103 GVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMG 162
             P+I + ++ + +  L          ++I VTG+ GKTT  +++   L  LG   A + 
Sbjct: 81  IAPMIVVDDVLEAMIRLGCVARDRSAAKIIAVTGSVGKTTTKEMLRHVLSPLGRVHASVA 140

Query: 163 TTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVAG 222
           +  N +           G  L + A + +  + G     +  +   L   R+ + H    
Sbjct: 141 SFNNHW-----------GVPLTL-ARMPETTDFGVFEIGMNHAGEILPLTRMVRPH--VA 186

Query: 223 VFSNLSRDHLDYHGTMEAYAAAKFSLFSEHA-CQNAIINVDDAVGAQWVKQLPQAIGVSL 281
           V ++++  HL    +++  AAAK  +F       +A+IN D A     +++   A GVS 
Sbjct: 187 VVTSIAAAHLGNFTSLDEIAAAKAEIFEGVVNGGHAVINRDSA-QYDLLERAAAAAGVSH 245

Query: 282 VTK--PNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLSL 339
           V     N        E A    G  L         E+     G   A N L A+A     
Sbjct: 246 VHSFGANPRSEFRLAEFAGGAEGSVLWAGIGGRTLEIAIGAPGRHIAENALAAIAAATLA 305

Query: 340 GFEKSALLATAPKLRPVLGR 359
           G +   + A+   ++P  GR
Sbjct: 306 GADTDRVAASFATMQPEKGR 325