Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Sinorhizobium meliloti 1021

 Score =  256 bits (655), Expect = 1e-72
 Identities = 163/472 (34%), Positives = 243/472 (51%), Gaps = 14/472 (2%)

Query: 40  AALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVE 99
           A + I  +  DSR +K GD FVA+ G   DG  +I  A+++GA+ V+A            
Sbjct: 23  ATIEIGGITADSRQVKPGDLFVAVAGSKADGAAYIADALSRGASAVVAGTGTPA------ 76

Query: 100 YRAGVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAA 159
             AG PV  +++  + L++ A   YG     ++ VTGT GKT++     Q     G  AA
Sbjct: 77  -EAGAPVFAISDPRRFLAKAASSFYGRQPETMVAVTGTAGKTSVASFTRQIWAHSGFSAA 135

Query: 160 VMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHF 219
           ++GTTG       E  + TT + + +   L +LA+ G  + A+E SSHGL Q R+  +  
Sbjct: 136 MIGTTGVVAPGRTEYGSLTTPDPVSLHKLLAELADEGVTHAAMEASSHGLDQRRLDGVEL 195

Query: 220 VAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQN--AIINVDDAVGAQWVKQLPQAI 277
            A  F+NL RDH+DYH T+E Y A+K  LF     +   A+I  DD   A+ +    +A 
Sbjct: 196 AAAAFTNLGRDHMDYHPTVEHYMASKMRLFGALLPKGSPAVIFADDQWSAEAIAAARKA- 254

Query: 278 GVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLL 337
           G  + T       I  + V +     +          E+H PL G+F   N L+A    +
Sbjct: 255 GHDVRTVGRNGDFIALKRVEHFRHKQSAEVHVGDDIYEIHVPLAGDFQIANALVAAGLAM 314

Query: 338 SLGFEKSALLATAPKLRPVLGRMELF-QREQKAKMVVDYAHTPDALEKALRALRVHCAGQ 396
           S G    A  +   +L+   GR+EL  Q +  A   VDYAH PDAL   L ++R    G+
Sbjct: 315 STGITAKAAFSALERLQGASGRLELVGQTKDGALAYVDYAHKPDALANVLESVRPFTTGR 374

Query: 397 LWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPERAH 456
           +  + GCGGDRD+GKRP+M  IA + AD VI+TDDNPRSE P+ I A+++A     + A 
Sbjct: 375 VVVVFGCGGDRDKGKRPIMGEIASRLADVVIVTDDNPRSEVPEVIRAEIMAA---AKGAT 431

Query: 457 IEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQQLL 508
               R +A   A+      D +++AGKGHE+ Q + + T+ +SD    ++ L
Sbjct: 432 EIGDRAEAIRAAVGMLKTGDTLIVAGKGHEEGQTVGSVTLPFSDHAEVRKAL 483