Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella amazonensis SB2B

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 38/276 (13%)

Query: 131 LIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNALQIQATLR 190
           ++ +TG+NGK+T+T L+ + +    +KA  +G  GN  + ALE                 
Sbjct: 115 VLAITGSNGKSTVTTLVGE-MARADNKAVAVG--GNIGVPALE----------------- 154

Query: 191 DLAERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFS 250
            L  +GA+   LE SS  L       LH +AG   N+S DH+D +  +EAY  AK  L+ 
Sbjct: 155 -LLGKGAELFVLELSSFQLET--THSLHCIAGTCLNISEDHMDRYTDLEAYRQAKLRLYP 211

Query: 251 EHACQNAIINVDDAVGAQWVKQLPQAIGVSLVTKPNTAQAIWAREVAYAESGITLNFESS 310
           +   + ++ N DDA  A    +    +   L         +   ++ +  S I +N    
Sbjct: 212 Q--SKLSVYNRDDA--ATIPDEPRNTVSFGLGVPELDDWGLMDGKIYHGASEI-MNL--- 263

Query: 311 WGEGELHAPLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAK 370
                L   LIG  N  NLL A+A   + G  + A++  A +   +  R EL        
Sbjct: 264 -----LDVALIGSHNHANLLAAMALCEAAGISREAMVKVAKEFTGLAHRCELVASHNSIA 318

Query: 371 MVVD-YAHTPDALEKALRALRVHCAGQLWAIVGCGG 405
            V D  A    A   AL  L  H  G +  I G  G
Sbjct: 319 WVNDSKATNVGATVAALNGLAEH-LGDIILIAGGDG 353