Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase (RefSeq) from Shewanella amazonensis SB2B

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 92/357 (25%), Positives = 161/357 (45%), Gaps = 39/357 (10%)

Query: 42  LVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYR 101
           +V++HL+ DSR +  G  FVA++G   DG +F + A A GA+ +L E          E  
Sbjct: 22  VVVSHLDSDSRKMTVGSLFVALKGERFDGHEFAEAAAAAGASALLVER---------ELP 72

Query: 102 AGVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVM 161
             +P + +A+  + + ++   +    +   + +TG+NGKT++ +++A    +L    +V+
Sbjct: 73  LALPQLVVADTQKAMGQIGALVRDSVNPVCVALTGSNGKTSVKEMVA---TVLSQHHSVL 129

Query: 162 GTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSH--GLVQGRVKKLHF 219
            T GN              N + +  TL  L E+G +Y   E  ++  G +      +  
Sbjct: 130 FTAGN------------FNNEIGVPLTLLRL-EQGHEYGVFELGANHKGEIDYTSSLVRP 176

Query: 220 VAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQN--AIINVDDAVGAQWVKQLPQAI 277
              + +N+   HL+  G+    A AK  ++  H  Q+   I+N+DD      + +L    
Sbjct: 177 SVSLVNNVGSAHLEGFGSEAGVAEAKSEIYL-HLAQDGVGIVNLDDRYAETMLNKLK--- 232

Query: 278 GVSLVTKPNTAQA-IWAREVAYAESGITLNFESSWGEG-ELHAPLIGEFNACNLLLALAT 335
           G  ++T    A A I AREV     G    +    G+   +  PL G+    N L   A 
Sbjct: 233 GKRVLTFGLGAGAEITAREVTADAFGRYSFYLCHGGDHVTVSLPLAGKHQVSNALATAAI 292

Query: 336 LLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVD--YAHTPDALEKALRALR 390
            ++LG     + A   KL PV GRM    R+    ++VD  Y   P+++  A+  L+
Sbjct: 293 CIALGLPLQEIAAGLAKLAPVKGRM--MPRQLGRLLLVDDSYNANPNSVGAAIDWLK 347