Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD from Phaeobacter inhibens DSM 17395

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 22/162 (13%)

Query: 130 QLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNALQIQATL 189
           +++ VTG+NGK+T   L+   L+  G ++ + G  G G L+ ++P  +     L++ +  
Sbjct: 121 RIVAVTGSNGKSTTVALLHHILQEAGRESQLAGNIGRGVLD-IDPPGSGGIVVLELSSYQ 179

Query: 190 RDLAERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLF 249
            DLA                     + L     VF+NLS DHLD H  M  Y AAK  LF
Sbjct: 180 TDLA---------------------RALTPDVAVFTNLSPDHLDRHAGMGGYFAAKRRLF 218

Query: 250 SEHACQNAIINVDDAVGAQWVKQLPQAIGVSLVTKPNTAQAI 291
           +E     AII VD+  G     QL +A     V + + +Q +
Sbjct: 219 AEGGPDRAIIGVDEDEGLYLAGQLSEAASDDRVIRISASQKL 260