Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase MurE from Phaeobacter inhibens DSM 17395

 Score =  264 bits (674), Expect = 6e-75
 Identities = 173/469 (36%), Positives = 252/469 (53%), Gaps = 16/469 (3%)

Query: 43  VITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRA 102
           +I  + +DSR +  G  F A+ G  V G +F   A+  GA  +L +A    +   +   +
Sbjct: 23  MIRGIAVDSRKVVEGGLFAALPGSQVHGAKFTPAALGNGAAAILTDAAGAQIVAQLLRES 82

Query: 103 GVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQ-WLELLGHKAAVM 161
            V ++ + +  Q L+  A   +G     ++ VTGTNGKT++   + Q W+EL GH+A  +
Sbjct: 83  TVALVVVEDPRQALAYAAALWFGAQPETMVAVTGTNGKTSVASFVRQIWVEL-GHQAVNL 141

Query: 162 GTTG-NGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFV 220
           GTTG  G  +   P  +TT   + +   L   A  G  + A+E SSHGL Q R+  +H  
Sbjct: 142 GTTGVEGSWS--HPLNHTTPEPVTLHDALAQAAAAGVTHAAMEASSHGLEQRRLDGVHLA 199

Query: 221 AGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQN--AIINVDDAVGAQWVKQLPQAIG 278
           A  F+N ++DHLDYH T EAY  AK  LF      +  A+IN+DD  G Q ++ +  A G
Sbjct: 200 AAGFTNFTQDHLDYHETFEAYFTAKAGLFRRVLPDDGVAVINMDDPRGEQ-MRAVAAARG 258

Query: 279 VSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPL--IGEFNACNLLLALATL 336
             +++       +      Y  SG  + F  +W +    A L  IG F A N+LLA   +
Sbjct: 259 HEVISVGRGLGDLSLVGARYDASGQDMRF--TWHDKPYQARLNLIGGFQAENILLACGLV 316

Query: 337 LSLGFEKSALLATAPKLRPVLGRMELFQ-REQKAKMVVDYAHTPDALEKALRALRVHCAG 395
           ++ G +  A+  T P L+ V GRM+L   RE  A + VDYAHTPDA+  A++ALR H  G
Sbjct: 317 IASGEDPQAVFDTLPHLQTVRGRMQLAATRENGATVFVDYAHTPDAVATAIKALRPHVLG 376

Query: 396 QLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPERA 455
           +L AIVG GGDRD  KRP+M   A+  AD VI+TDDNPRSE P  I A +  G   P+  
Sbjct: 377 RLVAIVGAGGDRDAAKRPLMGQAAQNNADLVIVTDDNPRSEDPAVIRAAVKGGA--PDAM 434

Query: 456 HIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETA 504
            +   R +A    +   GA D +L+ GKGHE  Q++ ++ + + D E A
Sbjct: 435 EV-GDRAEAILRGVDALGAGDALLICGKGHETGQIVGSDVLPFDDVEQA 482