Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Dechlorosoma suillum PS

 Score =  322 bits (826), Expect = 2e-92
 Identities = 203/479 (42%), Positives = 266/479 (55%), Gaps = 19/479 (3%)

Query: 44  ITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAG 103
           +T LE DSR ++ GD FVA  GHA DGR FI  A+ +GA  V  EA       W    A 
Sbjct: 21  VTRLENDSRRVQPGDVFVAYPGHAADGRSFIPAALEKGAAGVFWEARDF---AWNPAWAA 77

Query: 104 VPVIYLAELGQHLSELAGRLYGGHHNQL--IGVTGTNGKTTITQLIAQWLELLGHKAAVM 161
           VP + +  L      LA  +YG    QL  +GVTGTNGKTT +Q IAQ L   G   AV+
Sbjct: 78  VPQLGVDNLQSFAGHLANLVYGRPSEQLALVGVTGTNGKTTCSQWIAQALGGAGRSCAVI 137

Query: 162 GTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVA 221
           GT GNGF +AL  AANTT +AL +   L +    GA   A+E SS GL QGR     F  
Sbjct: 138 GTLGNGFPDALGEAANTTPDALALHRLLAEYKAAGAVACAMEVSSIGLDQGRCHGARFSV 197

Query: 222 GVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDDAVGAQWVKQLPQAIGVSL 281
            VF+NL+RDHLDYHGTM AY AAK  LF+      A+IN+DD  G + + Q   ++ +  
Sbjct: 198 AVFTNLTRDHLDYHGTMAAYGAAKERLFAWPELNEAVINLDDPFGRELLAQTTASLRIGY 257

Query: 282 VTKPNTA-QAIW---AREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLL 337
             +   A +A W   A  + +   G+     +  G   +   L+G +N  NLL     LL
Sbjct: 258 TLEGRQATEADWLLSAENLRHGAEGLAFTLIAPQGRVVVETGLVGRYNVANLLAVAGALL 317

Query: 338 SLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAHTPDALEKALRALRVHC---A 394
           +LG     +     +L P  GRM+ F  +    +VVDYAH+PDALE AL ALR       
Sbjct: 318 ALGLPLETVGQRLCRLTPPAGRMQRFGGKGLPLVVVDYAHSPDALENALTALREVTQARG 377

Query: 395 GQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPER 454
           G+L  + GCGGDRD+GKRP+M ++A + AD V+LT DNPRSE P AI+A++ AG   PE 
Sbjct: 378 GRLHCVFGCGGDRDKGKRPLMGSVAARLADEVLLTSDNPRSEDPLAILAEIRAGA--PEA 435

Query: 455 AHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANET----IHYSDRETAQQLLE 509
           A +E  R  A ++A+  A   D++L+AGKGHE YQ +          YSD E   + L+
Sbjct: 436 A-LEAEREVAVAHAVLRADVADVVLVAGKGHEPYQEIMGAAGLVRRPYSDIEAVARALQ 493