Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dechlorosoma suillum PS

 Score = 75.1 bits (183), Expect = 5e-18
 Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 37/354 (10%)

Query: 50  DSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADA-QHLNGWVEYRAGVPVIY 108
           DSR +  G+ FVA++G   DG +++ +A  +GA   +   D  + L G    +  +P++ 
Sbjct: 28  DSRSVGRGELFVALRGERFDGHEYLAQAGERGACAAVVAVDTVEQLQG----KVSLPLVA 83

Query: 109 LAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLE----LLGHKAA--VMG 162
           +A+    L  LAG         LI VTG+NGKT+  ++IA  L+    L G+  A  V+ 
Sbjct: 84  VADTRLALGALAGYWRAKFSLPLIAVTGSNGKTSTKEMIASILQAQAVLDGYDPAMVVLA 143

Query: 163 TTGNGFLNALEPAANTTGNALQIQATLRD-LAERGAQYTALETSSHGLVQGRVKKLHFVA 221
           T GN F N +          L+++ T R  + E G  +        G +    +      
Sbjct: 144 TQGN-FNNDI----GLPLTLLKLRTTHRSGVIEMGMNHP-------GEIGYLTRLAQPTV 191

Query: 222 GVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQN-AIINVDDAVGAQW--VKQLPQAIG 278
            + +N  R HL+  G ++  A  K ++++       A+++ DDA  A W  V +  + + 
Sbjct: 192 ALVTNAQRAHLEGMGDLQQVAEEKATIYAGLKPGGVALVSADDAFAAYWKGVNERRRVVT 251

Query: 279 VSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLS 338
             L    +    +   ++   E+ I L   S  G   +   + G  NA N + A A  L+
Sbjct: 252 FGLDKPADVGGKV---QLHGLETRIDLT--SPKGNAAIRLRVPGLHNARNAVAAAAAALA 306

Query: 339 LGFEKSALLATAPKLRPVLGRMELFQREQKAKMVV---DYAHTPDALEKALRAL 389
            G   +A++      R V GR++  QR+  A  V+    Y   PD++   +  L
Sbjct: 307 GGISLAAVVGGLESFRGVKGRLQ--QRQAAAGAVILDDTYNANPDSVRAGIDVL 358