Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., Probable UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase MurE from Mycobacterium tuberculosis H37Rv

 Score =  235 bits (600), Expect = 3e-66
 Identities = 177/480 (36%), Positives = 238/480 (49%), Gaps = 26/480 (5%)

Query: 44  ITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAE-ADAQHLNGWVEYRA 102
           +T + L ++ +  GD F A+ G    G + +  AIA+GA  VL + A    + G    RA
Sbjct: 62  VTGVTLRAQDVSPGDLFAALTGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAG----RA 117

Query: 103 GVPVIYLAELGQHLSELAGRLYGGHHNQL--IGVTGTNGKTTITQLIAQWLELLGHKAAV 160
            VPV+        L  LA  +YG    +L  IG+TGT+GKTT T L+   L   G  A +
Sbjct: 118 AVPVLVHPAPRGVLGGLAATVYGHPSERLTVIGITGTSGKTTTTYLVEAGLRAAGRVAGL 177

Query: 161 MGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFV 220
           +GT G     A  P+A TT  A  +QA L  + ERG     +E SSH L  GRV    F 
Sbjct: 178 IGTIGIRVGGADLPSALTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFA 237

Query: 221 AGVFSNLSRDHLDYHGTMEAYAAAKFSLF---SEHACQNAIINVDDAVGAQWVKQLPQAI 277
            G F+NLSRDHLD+H +M  Y  AK SLF   S    + A++ +DD  G     +   AI
Sbjct: 238 VGAFTNLSRDHLDFHPSMADYFEAKASLFDPDSALRARTAVVCIDDDAGRAMAARAADAI 297

Query: 278 GVSLVTKPNTAQAIW-AREVAYAESG---ITLNFESSWGEGELHAPLIGEFNACNLLLAL 333
            VS   +P    A W A +VA  ++G    T    +  G   +   L G +N  N L+AL
Sbjct: 298 TVSAADRP----AHWRATDVAPTDAGGQQFTAIDPAGVGH-HIGIRLPGRYNVANCLVAL 352

Query: 334 ATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAHTPDALEKALRALRVHC 393
           A L ++G      +    ++R V GR+E   R Q    +VDYAH P+AL   L  L  H 
Sbjct: 353 AILDTVGVSPEQAVPGLREIR-VPGRLEQIDRGQGFLALVDYAHKPEALRSVLTTL-AHP 410

Query: 394 AGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTY-- 451
             +L  + G GGDRD GKR  M  IA Q AD V++TDDNPR E P AI  +++AG     
Sbjct: 411 DRRLAVVFGAGGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTAIRREILAGAAEVG 470

Query: 452 --PERAHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQQLLE 509
              +   I   R  A  +A+  A   D++L+AGKGHE  Q        + DR      LE
Sbjct: 471 GDAQVVEIADRR-DAIRHAVAWARPGDVVLIAGKGHETGQRGGGRVRPFDDRVELAAALE 529