Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase MurF from Mycobacterium tuberculosis H37Rv

 Score = 81.3 bits (199), Expect = 8e-20
 Identities = 112/412 (27%), Positives = 168/412 (40%), Gaps = 51/412 (12%)

Query: 20  THSAISELIAPWLELTDPKLAA--LVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKA 77
           T + I+E++   +    P+ AA   V   +E DSR I  G  F+A+ G   DG      A
Sbjct: 5   TVAQIAEIVGGAVADISPQDAAHRRVTGTVEFDSRAIGPGGLFLALPGARADGHDHAASA 64

Query: 78  IAQGANLVLAE-------------ADAQHLNGWVEY-RAGVPVIYLAELGQHLSELAGRL 123
           +A GA +VLA              A    L G +E+   G     LA L +  + +A +L
Sbjct: 65  VAAGAAVVLAARPVGVPAIVVPPVAAPNVLAGVLEHDNDGSGAAVLAALAKLATAVAAQL 124

Query: 124 YGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNAL 183
             G    +IG+TG++GKT+   L+A  L  LG   A  G+             N  G+  
Sbjct: 125 VAGGLT-IIGITGSSGKTSTKDLMAAVLAPLGEVVAPPGSFN-----------NELGHPW 172

Query: 184 QIQATLRDLAERGAQYTALETSS--HGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAY 241
            +   LR  A R   Y  LE ++  HG +    +      GV  N+   HL   G+ E  
Sbjct: 173 TV---LR--ATRRTDYLILEMAARHHGNIAALAEIAPPSIGVVLNVGTAHLGEFGSREVI 227

Query: 242 AAAKFSLFSEHACQNAII-NVDDAVGAQWVKQLPQAIGVSLVTKPNTAQAIWAREVA--- 297
           A  K  L        A++ N DD   A   K    A  V  V++ NT   +WA  V+   
Sbjct: 228 AQTKAELPQAVPHSGAVVLNADDPAVAAMAKL--TAARVVRVSRDNTGD-VWAGPVSLDE 284

Query: 298 YAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPV- 356
            A    TL+   +  + E+   + G+    N L A A  L  G     + A      PV 
Sbjct: 285 LARPRFTLHAHDA--QAEVRLGVCGDHQVTNALCAAAVALECGASVEQVAAALTAAPPVS 342

Query: 357 LGRMELFQREQKAKMVVD-YAHTPDALEKALRAL-----RVHCAGQLWAIVG 402
             RM++  R     ++ D Y   PD++   L+AL     +     + WA++G
Sbjct: 343 RHRMQVTTRGDGVTVIDDAYNANPDSMRAGLQALAWIAHQPEATRRSWAVLG 394