Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase from Marinobacter adhaerens HP15

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 104/406 (25%), Positives = 180/406 (44%), Gaps = 51/406 (12%)

Query: 39  LAALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWV 98
           LA++    +  D+R ++ G  FVA++G   DG +F+ +A+ +GA  ++ +    +L    
Sbjct: 23  LASVSFAGVSTDTRTLEPGQLFVALRGENFDGHRFLQQAMDKGAVGLVVDTPDTNL---- 78

Query: 99  EYRAGVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKA 158
                +P + + E  + L+ LA          ++ +TG++GKTT+ ++ A  L  +G   
Sbjct: 79  ----ALPQLVVNETLEALARLAAANREESTAAILAITGSSGKTTVKEMCAAILSQMGK-- 132

Query: 159 AVMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLH 218
             + T GN              N + +  TL  L+    QY  +E  + GL  G +   H
Sbjct: 133 -TLSTKGN------------LNNHIGVPLTLFGLSPEH-QYGVIELGASGL--GEIA--H 174

Query: 219 FVA------GVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNA-IINVDDAVGAQWVK 271
            VA       + +N    HL+  G+ E    AK  +    A     ++N DD   AQW  
Sbjct: 175 TVALAKPRVAILTNAGEAHLEGFGSYENIVLAKGEIIDGVASDGLMVLNGDDPAFAQWRS 234

Query: 272 QLP--QAIGVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGEL---HAPLIGEFNA 326
           +    +  GVS +     A+A +   +   ++G T  F+ S  +G L      L G+ N 
Sbjct: 235 RAGARRVAGVSRLG----AEADYHAVIDGQDAG-TRTFQVSGPDGWLCRVTLGLEGDHNI 289

Query: 327 CNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVD-YAHTPDALEKA 385
            N+LLA+A    LG    A++A    + PV GR+++ +   +  ++ D Y   P +++ A
Sbjct: 290 TNMLLAIAATRELGASDQAIVAGLASVAPVKGRLQVLELSPEMTLIDDSYNANPSSMKAA 349

Query: 386 LRALRVHCAGQLWAIVGC----GGDRDRGKRPMMAAIAEQFADRVI 427
           L  L    AGQ  A++G     G   +   R +     E   DR+I
Sbjct: 350 LGVLAGR-AGQKIAVLGAMAELGAKANALHREVGVCAREHGIDRLI 394