Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Burkholderia phytofirmans PsJN

 Score = 78.6 bits (192), Expect = 5e-19
 Identities = 93/369 (25%), Positives = 143/369 (38%), Gaps = 31/369 (8%)

Query: 50  DSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAGVPVIYL 109
           DSR    GD FVAI+G   D   F+    A+    VL     Q    W      VP + +
Sbjct: 30  DSRSAGPGDLFVAIKGDRFDAHDFLPDVAARNVTAVLITRTPQD---WT-----VPALKV 81

Query: 110 AELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFL 169
            +    L  LA          L+ VTG+NGKTT+ ++IA          A + T GN   
Sbjct: 82  TDTRVGLGALARGWRRKFSMPLVAVTGSNGKTTVKEMIASIFAAAVGADARLATAGN--- 138

Query: 170 NALEPAANTTGNALQIQATLRDL-AERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNLS 228
                      N + +  TL  L A        L  +  G      K       V +N  
Sbjct: 139 ---------FNNDIGLPLTLFRLHAAHQLAVVELGMNHPGETLELAKIAEPTVAVVNNAQ 189

Query: 229 RDHLDYHGTMEAYAAAKFSLFSEHACQN-AIINVDDAVGAQWVKQLPQAIGVSLVT-KPN 286
           R+H ++  T+EA A    S+      +  A+   DDA  + W      A G  ++    N
Sbjct: 190 REHQEFMATVEAVALEHASVIHALTPEGVAVFPADDAYASIW---RVAATGSRIMDFALN 246

Query: 287 TAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLSLGFEKSAL 346
           +A+ I    V    +G  L+ ++  G+ E+   ++G+ NA N L A +  L+ G    A+
Sbjct: 247 SAERITEAAVKGTFAGNVLSIDTPEGQIEVTLQVLGDHNAHNALAATSAALAAGVSLDAI 306

Query: 347 LATAPKLRPVLGRMELFQR---EQKAKMVVD--YAHTPDALEKALRALRVHCAGQLWAIV 401
                    V GR+++ Q          V+D  Y   PD++  A+  L    A ++  + 
Sbjct: 307 KRGLESFGAVKGRLQVKQAVLGTLAGATVIDDTYNANPDSMRAAIDVLASRAAPRVLVMG 366

Query: 402 GCGGDRDRG 410
             G   D G
Sbjct: 367 DMGEVGDNG 375