Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  409 bits (1051), Expect = e-118
 Identities = 225/493 (45%), Positives = 294/493 (59%), Gaps = 13/493 (2%)

Query: 24  ISELIAPWLELTDPKLAALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGAN 83
           + +L+APW     P         L LDSR I+ GD F+A+ GH VDGRQFIDKA+AQGA 
Sbjct: 4   LRDLLAPWF----PYAGEQTFLELTLDSRAIRRGDVFLALPGHKVDGRQFIDKALAQGAT 59

Query: 84  LVLAEADAQHLNGWVEYRAGVPVIYLAELGQHLSELAGRLYG---GHHNQLIGVTGTNGK 140
            VL   D     G V        IY  +L + +S +A   Y    G    ++G+TGTNGK
Sbjct: 60  AVLVHTDKIDEQGKVIATEQGVQIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGK 119

Query: 141 TTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYT 200
           T+ +QL AQ + LL  KAAVMGT GNG    L  + NTT +A+ +   L + A++G    
Sbjct: 120 TSTSQLCAQLVTLLEGKAAVMGTLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTC 179

Query: 201 ALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIIN 260
           A+E SSHGLVQGRV  + F   VF+NL+RDHLDYHG ME YA AK  LF   +  + ++N
Sbjct: 180 AMEVSSHGLVQGRVDAVPFDVAVFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVN 239

Query: 261 VDDAVGAQWVKQLPQAI----GVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGEL 316
           +DD VGA W+ +L        G S+  + +T  A + +   + + G+        GE ++
Sbjct: 240 LDDPVGAAWLSELANVPAKMWGFSI--EAHTEVAFYTKNAQFNDQGVQATLVWPEGEVDI 297

Query: 317 HAPLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYA 376
            +PL+G FN  NLL AL+ L   G +  AL +  P L PV GRME F       +VVDYA
Sbjct: 298 RSPLLGAFNLSNLLAALSALYLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYA 357

Query: 377 HTPDALEKALRALRVHCAGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSE 436
           HTPDA+E+AL ALR HCAG+LW + GCGGDRD+GKRP+M   AEQ ADR+++T DN RSE
Sbjct: 358 HTPDAIEQALNALRRHCAGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSE 417

Query: 437 SPQAIVADMVAGLTYPERAHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETI 496
            P  I+ D++ GLT+PERA  E  R  A  + +  A   D+ILLAGKGHE YQ  A    
Sbjct: 418 DPNQIITDIIQGLTHPERALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAGVRH 477

Query: 497 HYSDRETAQQLLE 509
            Y +R  A+QL E
Sbjct: 478 DYDERALARQLSE 490