Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas syringae pv. syringae B728a

 Score =  327 bits (837), Expect = 6e-94
 Identities = 196/449 (43%), Positives = 270/449 (60%), Gaps = 27/449 (6%)

Query: 13  LNARLIGEDRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVERELD 72
           L+ARL+G D + + VSTDSR I    LFVAL G RFD H++  Q    GAV  LVERE+ 
Sbjct: 14  LDARLVGGDCSFAGVSTDSRGIEPGQLFVALTGPRFDGHEYLDQVAAKGAVGALVEREVQ 73

Query: 73  -AECSQLVVADTKQALGQLGSWV-HAQCQTPTVAITGSCGKTTVKEMVASILSQKGQVLY 130
            A   QLVV DT++AL QLG+   +A    P  A+TGS GKTTVKEM+ASIL  +G VL 
Sbjct: 74  GAALPQLVVLDTRKALAQLGAMNRNAFVDRPVAAVTGSSGKTTVKEMLASILRTRGPVLA 133

Query: 131 TQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVALVNNVAAAHLE 190
           T+GN NN++GVPLTLL    E   AVIELGA+ VGEIAYT +L KP VA++ N   AH+ 
Sbjct: 134 TRGNLNNELGVPLTLLELAPEYTSAVIELGASRVGEIAYTVSLAKPHVAMITNAGTAHVG 193

Query: 191 GFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDHNADFYP 250
            FG  D +  AKGEI +GL AG  A++NL+      W+    ++ + TF+ TD  AD Y 
Sbjct: 194 EFGGPDRIVEAKGEILEGLDAGGTAVLNLEDKAFPIWRKRAGNRNILTFALTDSAADVYA 253

Query: 251 RDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAH 310
            ++  +A G  +F L +P+G   V+L ++G HNV+NALAAAA    MG  L  I  GL +
Sbjct: 254 SELSRDARGCPAFNLNSPLGTARVQLNLLGTHNVSNALAAAAAGCAMGVPLEGIVTGLNN 313

Query: 311 LSKVKGRVDMAQLRDDIT-LIDDSYNASVPAMKAAVELLGSFSAVRWLILGNMAELGDES 369
           +  VKGR  +AQ+  + T +IDD+YNA+  ++ AAV++L  F+    L+LG++ ELGD +
Sbjct: 314 VQPVKGRA-VAQIASNGTRVIDDTYNANPASINAAVDILTGFTGRTVLVLGDIGELGDWA 372

Query: 370 LALHQQVGEHAA----------PFGFEFVLTYGKDAKVISDLCQGHHFATHQDMMTFIEQ 419
              H++VG +AA          P     V  +G+ A         +HFA+  +++     
Sbjct: 373 EQGHREVGAYAAGKVSALYAVGPLMTHAVSAFGEHA---------YHFASQAELIA---- 419

Query: 420 HIEQQQGRTQVLLVKGANSAGMSKIAAAL 448
            +  +Q     LL+KG+ SA M  + AAL
Sbjct: 420 ALGAEQDPDTTLLIKGSRSAAMEHVVAAL 448