Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Synechococcus elongatus PCC 7942

 Score =  203 bits (517), Expect = 8e-57
 Identities = 143/443 (32%), Positives = 229/443 (51%), Gaps = 31/443 (6%)

Query: 18  IGE--DRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVERELD--- 72
           +GE  DR   +++TDSR I    +F+AL G+RFD HDF +QA+  GA+A +V+R+     
Sbjct: 21  VGEACDRPARSLTTDSRQIQPGDIFLALRGDRFDGHDFVAQALADGAIAAIVDRDYQPPS 80

Query: 73  --AECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASILSQKGQVLY 130
             A    L V +T  A  ++      +C  P + ITGS GKTT KE++A++L+ +G VL 
Sbjct: 81  DLAAGHLLQVDNTLWAYQEVARLWRQRCSLPLIGITGSVGKTTTKELIAAMLAVRGPVLK 140

Query: 131 TQGNFNNDIGVPLTLLRSTTEDDY-AVIELGANHVGEIAYTTALVKPDVALVNNVAAAHL 189
           T+ N+NN+IGVP T+L+   +  + AV+E+G    G+IA    + +P++A++ NV  AH+
Sbjct: 141 TEANYNNEIGVPKTVLQIDPDHHWAAVLEMGMRGRGQIAELARIAQPNIAVITNVGTAHI 200

Query: 190 EGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDHNADFY 249
              GS   +  AK E+   L    +AI+N D++        L     +T+     N D  
Sbjct: 201 GLLGSEQAIAEAKCELLAQLSGTGLAILNADNHRLIATAQRLNLPRCRTYGL--QNGDLQ 258

Query: 250 PRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLA 309
            + + L  L +       P         + G HN  N LA  A++ E+G    E  + L+
Sbjct: 259 GQLIDLETLVVEGQRFRLP---------LPGAHNALNFLAGLAIAQELGLDW-EAFRDLS 308

Query: 310 HLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVRWL-ILGNMAELGDE 368
            ++  +GR    +L  DI L+D++YNA + +M AA++LL      R + +LG M ELGD 
Sbjct: 309 -VTLPQGRARRIELSPDIVLLDETYNAGLESMLAALQLLADTPGQRRIAVLGTMKELGDF 367

Query: 369 SLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLCQGHHFATH-----QDMMTFIEQHIEQ 423
           S   H+QVGE AA  G + +L Y    +  +        AT      +D+++ + Q ++ 
Sbjct: 368 SETYHRQVGEKAAALGLDRLLIYADPTEAAAMQAGASAIATQIFTNAEDLLSELRQSVQT 427

Query: 424 QQGRTQVLLVKGANSAGMSKIAA 446
                  LL K + S  + +I A
Sbjct: 428 GDR----LLFKASRSVALDRILA 446