Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase from Sinorhizobium meliloti 1021

 Score =  213 bits (541), Expect = 1e-59
 Identities = 154/464 (33%), Positives = 230/464 (49%), Gaps = 22/464 (4%)

Query: 7   SQLSSVLNARLIGE-DRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVAL 65
           S L + +N R +G     ++ +S DSR I     F A+ G+R D HD+A  A+  GA  L
Sbjct: 8   SDLLAAMNGRPVGNLPEGITGISIDSRTIGDGEAFFAIRGDRVDGHDYAGIALANGAALL 67

Query: 66  LV-ERELDAE----CSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVAS 120
           +V E +L A        +VV D  +A+ +LG     +     +A+TGS GKTT KEM+  
Sbjct: 68  VVSEAKLPALGRLIAPMIVVDDVLEAMIRLGCVARDRSAAKIIAVTGSVGKTTTKEMLRH 127

Query: 121 ILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVAL 180
           +LS  G+V  +  +FNN  GVPLTL R     D+ V E+G NH GEI   T +V+P VA+
Sbjct: 128 VLSPLGRVHASVASFNNHWGVPLTLARMPETTDFGVFEIGMNHAGEILPLTRMVRPHVAV 187

Query: 181 VNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFS 240
           V ++AAAHL  F S+D +  AK EI++G+  G  A++N DS   D  +   A   V    
Sbjct: 188 VTSIAAAHLGNFTSLDEIAAAKAEIFEGVVNGGHAVINRDSAQYDLLERAAAAAGVSHV- 246

Query: 241 ATDHNADFYPR-DVRLN--ALGIASFTLVTPVG--EVGVELGIMGQHNVANALAAAALSL 295
              H+    PR + RL   A G     L   +G   + + +G  G+H   NALAA A + 
Sbjct: 247 ---HSFGANPRSEFRLAEFAGGAEGSVLWAGIGGRTLEIAIGAPGRHIAENALAAIAAAT 303

Query: 296 EMGASLAEIGQGLAHLSKVKGRVDMAQLR---DDITLIDDSYNASVPAMKAAVELLGSFS 352
             GA    +    A +   KGR    +LR     +T+ID+SYNA+  +M+AA+ LL    
Sbjct: 304 LAGADTDRVAASFATMQPEKGRGLRHRLRIGTGHLTVIDESYNANPASMRAAISLLRDAE 363

Query: 353 AV----RWLILGNMAELGDESLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLCQGHHFA 408
                 R  +LG+M E+G+ S A+H  +       G   V   G +   + D        
Sbjct: 364 PAPGGRRIAVLGDMLEMGEHSAAVHAALAGPVVEAGIADVWLAGPEMAHLRDALPPEVSV 423

Query: 409 THQDMMTFIEQHIEQQQGRTQVLLVKGANSAGMSKIAAALKEKF 452
            H+D++  +  +         V++VK +   G +KI  AL + +
Sbjct: 424 VHRDVVGDLTAYALGAVSAGDVVMVKSSKGTGCAKIVQALLDAY 467