Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase from Marinobacter adhaerens HP15

 Score =  284 bits (726), Expect = 5e-81
 Identities = 182/454 (40%), Positives = 260/454 (57%), Gaps = 14/454 (3%)

Query: 6   LSQLSSVLNARLIGEDRA---VSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGA 62
           L++    L A+    D A    + VSTD+R +    LFVAL GE FD H F  QA+  GA
Sbjct: 7   LAEAKGWLGAQCASGDLASVSFAGVSTDTRTLEPGQLFVALRGENFDGHRFLQQAMDKGA 66

Query: 63  VALLVER-ELDAECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASI 121
           V L+V+  + +    QLVV +T +AL +L +    +     +AITGS GKTTVKEM A+I
Sbjct: 67  VGLVVDTPDTNLALPQLVVNETLEALARLAAANREESTAAILAITGSSGKTTVKEMCAAI 126

Query: 122 LSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVALV 181
           LSQ G+ L T+GN NN IGVPLTL   + E  Y VIELGA+ +GEIA+T AL KP VA++
Sbjct: 127 LSQMGKTLSTKGNLNNHIGVPLTLFGLSPEHQYGVIELGASGLGEIAHTVALAKPRVAIL 186

Query: 182 NNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSA 241
            N   AHLEGFGS + +  AKGEI  G+ +  + ++N D      W++    + V   S 
Sbjct: 187 TNAGEAHLEGFGSYENIVLAKGEIIDGVASDGLMVLNGDDPAFAQWRSRAGARRVAGVSR 246

Query: 242 TDHNADFYPRDVRLNALGIASFTLVTPVGEV-GVELGIMGQHNVANALAAAALSLEMGAS 300
               AD++      +A G  +F +  P G +  V LG+ G HN+ N L A A + E+GAS
Sbjct: 247 LGAEADYHAVIDGQDA-GTRTFQVSGPDGWLCRVTLGLEGDHNITNMLLAIAATRELGAS 305

Query: 301 LAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVRWLILG 360
              I  GLA ++ VKGR+ + +L  ++TLIDDSYNA+  +MKAA+ +L   +  +  +LG
Sbjct: 306 DQAIVAGLASVAPVKGRLQVLELSPEMTLIDDSYNANPSSMKAALGVLAGRAGQKIAVLG 365

Query: 361 NMAELGDESLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLCQGHHFATHQDMMTFIEQH 420
            MAELG ++ ALH++VG  A   G + ++T G   +  +D      F    ++    EQ 
Sbjct: 366 AMAELGAKANALHREVGVCAREHGIDRLITVGPGCEGYAD-----GFGESTELGLSHEQA 420

Query: 421 IEQQQGRTQ---VLLVKGANSAGMSKIAAALKEK 451
           +E   G       +LVKG+ S+ M ++   +KEK
Sbjct: 421 VESAIGDKNTPLTVLVKGSRSSAMERVVEGIKEK 454