Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 98/374 (26%), Positives = 151/374 (40%), Gaps = 69/374 (18%)

Query: 10  SSVLNARLIGEDRA-VSAVSTDSRAIPAE------ALFVALVGERFDAHDFASQAVT--- 59
           S V  ARL+    A V  +  D+  +PA          V +V    DA  FA  AV    
Sbjct: 25  SGVAAARLLHAKGARVRVLERDAANVPATFAEWAAGAGVEIVCGAHDAAHFADAAVVVPS 84

Query: 60  -GGAVALLVERELDAECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMV 118
            G AVA L    L A     V+A+ + A  +L          P +A+TG+ GKTT   + 
Sbjct: 85  PGVAVATL-RPYLPATGGPEVMAEMELAWRELSG-------EPVIAVTGTSGKTTTVSLC 136

Query: 119 ASILSQKGQVLYTQGNFNNDIGVPL-TLLRSTTEDDYAVIELGANHVGEIAYTTALVKPD 177
           A +L  +G  ++  GN    IG PL   +      D  VIE+ +  +     T +  +P 
Sbjct: 137 AHMLRTQGLSVFLGGN----IGTPLCEYVLEGKRADVLVIEISSFQL----QTCSTFRPR 188

Query: 178 VALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVK 237
           VA++ N+ A HL+    M     AK  +++      +A+       G+    ++    VK
Sbjct: 189 VAMLLNITANHLDYHADMQEYIDAKFRLFRCQDEDDLAVF------GEGLAPLVDRYGVK 242

Query: 238 ----TFSATDHNADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAAL 293
               TF ATD  A                            E  + G HN ANA AA   
Sbjct: 243 ARRVTFRATDRFA----------------------------ESRLFGAHNRANAEAAWTA 274

Query: 294 SLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSA 353
           + E G +L    Q +A  + +  R++    R  +  ++DS   +V A++ A+E   +F  
Sbjct: 275 AREFGVTLENALQAVATFAPMPHRLEQVAERGGVLYVNDSKCTTVSALRVALE---AFDR 331

Query: 354 VRWLILGNMAELGD 367
              L+ G   + GD
Sbjct: 332 PVLLLAGGKFKGGD 345