Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 65.1 bits (157), Expect = 5e-15
 Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 28/281 (9%)

Query: 103 VAITGSCGKTTVKEMVASILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGAN 162
           +A+TGS GK+T   ++  +L+  G+     GN    IG  +  +    +    V+EL   
Sbjct: 123 IAVTGSNGKSTTSALIHHVLTAAGRPTQLAGN----IGRGVLDIDPGEDGGIVVLELS-- 176

Query: 163 HVGEIAYTTALVK---PDVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNL 219
                +Y T L +   PD+A+  N++  HL+  G M G   AK  ++  +     A++  
Sbjct: 177 -----SYQTELARALTPDIAVFTNLSPDHLDRHGGMGGYFAAKRRLFT-IGGPDRAVIGT 230

Query: 220 DSNGGDYWKAVLA-----DKTVKTFSATDHNADFYPRDVRLNALGIASFTLVTPVGEVGV 274
           D   G +  + L+     D+ ++  SA      +    V      +A        G + +
Sbjct: 231 DEPEGLFLASQLSVAPADDRVIRVTSAKPSGPGWV---VSARKGFLAEHRKGRQTGSIDL 287

Query: 275 E--LGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDD 332
               G+ G HN  NA  A A    +G +  +I  G A    +  R  +    + +T ++D
Sbjct: 288 RPIPGLPGAHNHQNAACAYAACRSLGLAPRQIEAGFASFKGLPHRSQIVGTANGVTFVND 347

Query: 333 SYNASVPAMKAAVELLGSFSAVRWLILGNMAELGDESLALH 373
           S   +V    +A + L +F  +RW+  G   E G  +L  H
Sbjct: 348 SKATNV---DSAAKALQAFDRIRWIAGGLEKEGGLAALTPH 385