Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase from Paraburkholderia bryophila 376MFSha3.1

 Score =  236 bits (601), Expect = 2e-66
 Identities = 156/446 (34%), Positives = 220/446 (49%), Gaps = 18/446 (4%)

Query: 15  ARLIGEDRAV-SAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVERE-LD 72
           A +IG+D      VSTDSR+     LFVA+ GERFDAHDF          A LV R   D
Sbjct: 21  ATVIGDDSVTFERVSTDSRSAGPSDLFVAIKGERFDAHDFLGDVAARNVTAALVSRTPQD 80

Query: 73  AECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASILSQKGQV---L 129
                L V DT+  LG L      +   P VA+TGS GKTTVKEM+ASI +        L
Sbjct: 81  WSVPALRVTDTRVGLGALARGWRRKFGMPLVAVTGSNGKTTVKEMIASIFAAAVGADARL 140

Query: 130 YTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVALVNNVAAAHL 189
            T GNFNNDIG+PLTL R       AV+ELG NH GE +    + +P VA+VNN    H 
Sbjct: 141 ATAGNFNNDIGLPLTLFRLNAAHRLAVVELGMNHPGETSLLAKIAEPTVAVVNNAQREHQ 200

Query: 190 EGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDHNADFY 249
           E   +++ V      +   L    VA+   D      W+       +  F+    N+D  
Sbjct: 201 EFMATVEAVALEHASVIHALNPDGVAVFPADDAFASIWRVAATGNRIVDFAL---NSDER 257

Query: 250 PRDVRLNALGIASFTLV-TPVGEVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGL 308
             +  +          V TP G V + L ++G HN  NALAA + +L  G SL  I +GL
Sbjct: 258 TTEAAVTGRFDGKLLSVDTPQGHVEITLQVLGNHNAHNALAATSAALAAGVSLDAIKRGL 317

Query: 309 AHLSKVKGRVDMAQLR----DDITLIDDSYNASVPAMKAAVELLGSFSAVRWLILGNMAE 364
                VKGR+ +           T+IDD+YNA+  +M+AA+++L S ++ R L++G+M E
Sbjct: 318 ESFGAVKGRLQVKHAALGTLAGATVIDDTYNANPDSMRAAIDVLASHASPRVLVMGDMGE 377

Query: 365 LGDESLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLCQGHHFATHQ--DMMTFIEQHIE 422
           +GD     H+++G +A   G + +   G  ++   D C  +    H   D+ T + Q  +
Sbjct: 378 VGDNGPEFHREIGAYAKERGIDALYAMGDASR---DACTAYGAGAHHVADIGTLVAQLQQ 434

Query: 423 QQQGRTQVLLVKGANSAGMSKIAAAL 448
              G    LLVKG+    M ++  A+
Sbjct: 435 AGFGAAATLLVKGSRFMQMERVVDAV 460