Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) from Pseudomonas fluorescens FW300-N2E2

 Score = 71.2 bits (173), Expect = 7e-17
 Identities = 87/356 (24%), Positives = 142/356 (39%), Gaps = 28/356 (7%)

Query: 5   MDRWQGIQHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSG 64
           M R + I  V + G+G+ G++ V     Y  S +       +A P  E+L S  A    G
Sbjct: 13  MRRIRRIHFVGIGGVGMCGIAEVLLNLGYQVSGS-----DLKASPVTERLESFGAQIFIG 67

Query: 65  WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVD-TPVIAITGSNGK 123
              E   NAD++V +  +  + PE+   L   IPVV   E+ A  +     IA+ G++GK
Sbjct: 68  HRAENAANADVLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGK 127

Query: 124 STVTDLSGVLANAAGVKA--AVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKA 181
           +T T L   +  A G+     +GG +     +        Y++  +     +   L+   
Sbjct: 128 TTTTSLIASVFAAGGLDPTFVIGGRLNAAGTN-AQLGTSRYLIAEADESDASFLHLQPLV 186

Query: 182 AAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAET------AVVNADD---TQTFPDHAAHL 232
           A   N+  DHM  Y G  D+ + K    +          AVV  DD    +  P      
Sbjct: 187 AVVTNIDADHMATYDG--DFNKLKKTFVEFLHNLPFYGLAVVCLDDPVVREILPLIKRPT 244

Query: 233 QVVTFGVEQAAQFSLAQHQGREYLFA--RDEAVMACAELSLVGRHNVANVLTVLALLDSA 290
               FG +   +    + QG +  F   R +       +++ G HNV N L  + +    
Sbjct: 245 VTYGFGEDVDVRAINVRQQGMQTFFTVLRPDREPLDVSVNMPGNHNVLNALATICIATDE 304

Query: 291 GVNFRLALDALKSYTGLTHRCQVV----ADNHGIKWVND--SKATNVASTLAALSG 340
           GV+    +  L  + G+  R QV      D   +  V+D     T VA+ + A+ G
Sbjct: 305 GVSDEAIVQGLSGFQGVGRRFQVYGELPVDGGNVMLVDDYGHHPTEVAAVIKAVRG 360