Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) from Pseudomonas fluorescens FW300-N2E2

 Score =  330 bits (847), Expect = 4e-95
 Identities = 201/441 (45%), Positives = 256/441 (58%), Gaps = 14/441 (3%)

Query: 15  VVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSD---VALHRSGWNLEWLL 71
           +VVGLG +G+S+V +L      V+  V DTRE PP    L  D   V +     ++E+L 
Sbjct: 11  IVVGLGKSGMSLVRFLASR--GVSFAVADTRENPPELATLRRDYPQVDVRCGELDVEFLC 68

Query: 72  NADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTPVIAITGSNGKSTVTDLSG 131
            AD +  +PG+ALATP +Q   A G+ + GDIELFA +   P++AI+GSN KSTVT L G
Sbjct: 69  RADELYVSPGLALATPALQAAAARGVRLSGDIELFARNAKAPIVAISGSNAKSTVTTLVG 128

Query: 132 VLANAAGVKAAVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAFLNLSEDH 191
            +A AAG + AVGGN+G PALDL+S DVELYV+ELSSFQLETT  L  + A  LN+SEDH
Sbjct: 129 EMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDHLGAEVATVLNISEDH 188

Query: 192 MDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAHLQVVTF--GVEQAAQFSLAQ 249
           MDRY G+  Y  AK RIF  A   V N  D  T P     +   +F  GV     F L +
Sbjct: 189 MDRYSGLPAYHLAKHRIFRGARQVVFNRQDALTRPLLGEGMPCWSFGLGVPDFKGFGLRE 248

Query: 250 HQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTH 309
             G +YL    + +M   EL + G HN AN L  LAL  + G+ F   L AL+++ GL H
Sbjct: 249 ENGEKYLAFEFQNLMPVRELKIRGAHNQANALAALALGHAVGLPFDAMLSALRTFAGLEH 308

Query: 310 RCQVVADNHGIKWVNDSKATNVASTLAALSGL--KIEGQLYLLVGGVGKGADFTPLAPVL 367
           RCQ V D  G+ W NDSKATNV + LAA+ GL   I G+L L+ GG GKGADF  L   +
Sbjct: 309 RCQWVRDLDGVAWYNDSKATNVGAALAAIEGLGADIAGKLVLIAGGDGKGADFKDLRDPV 368

Query: 368 ATLPVQLCCFGVD----GHQFMPLHPSARFYDSMESIIRSIRPQLKSGDMVLLSPACASF 423
           A     +   G D            P  R   S++  ++  R   + GD VLLSPACASF
Sbjct: 369 AANCRAVVLMGRDRELIAQALGDAVPLVR-VGSLDEAVQQCRALAQPGDAVLLSPACASF 427

Query: 424 DQFKNFMARGDIFAQLARQYA 444
           D FKN+  RG +FA+ A   A
Sbjct: 428 DMFKNYEERGQLFARAAEDLA 448