Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) from Pseudomonas fluorescens FW300-N2E2

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 82/318 (25%), Positives = 129/318 (40%), Gaps = 26/318 (8%)

Query: 43  DTREAPPGQEQLSSDVALHRSGWNLEWLLNA-DLVVTNPGIALATPEIQQVLAAGIPVVG 101
           D    PP   QL +       G++   L  A DLVV    ++   P ++ VL  G+P V 
Sbjct: 31  DANVYPPMSTQLEAQGIELTQGYDPAQLDPAPDLVVIGNAMSRGNPAVEYVLNKGLPYVS 90

Query: 102 DIELFAWHV--DTPVIAITGSNGKSTVTDLSGVLANAAGVKAA--VGG---NIGVPALDL 154
             +  A HV     V+A+ G++GK+T + +   +   AG+     +GG   N  V A   
Sbjct: 91  GPQWLADHVLQGRWVLAVAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFSVSARLG 150

Query: 155 ISPDVELYVLELSSFQLETTSSL---KLKAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDH 211
            +P   +   E  S   +  S     + + A   NL  DH D +  +     A  R F H
Sbjct: 151 GTPFFVIEADEYDSAFFDKRSKFVHYRPRTAILNNLEYDHADIFPDL----PAIERQFHH 206

Query: 212 ------AETAVVNADD---TQTFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEA 262
                 +E  V++       Q   +      V T G     Q  L +  G ++    +  
Sbjct: 207 LVRTIPSEGLVIHPTTEPALQRVIEMGCWTPVQTTGAGGQWQVKLLKDDGSQFEVMFEGV 266

Query: 263 VMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQVVADNHGIKW 322
                E  + G+HNVAN L  LA     GV   + + AL ++  +  R + VA+ +GI  
Sbjct: 267 SQGVVEWDMTGQHNVANALATLAAARHVGVVPSMGIAALSAFKSVKRRMEKVAEVNGITI 326

Query: 323 VND--SKATNVASTLAAL 338
            +D     T +A+TL  L
Sbjct: 327 YDDFAHHPTAIATTLDGL 344