Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase from Pseudomonas stutzeri RCH2

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 84/318 (26%), Positives = 127/318 (39%), Gaps = 26/318 (8%)

Query: 43  DTREAPPGQEQLSSDVALHRSGWNLEWLLNA-DLVVTNPGIALATPEIQQVLAAGIPVVG 101
           D    PP   QL +       G+    L  A DLVV    ++ + P ++ VL  G+P V 
Sbjct: 31  DANVYPPMSTQLQAQGIELTQGYEPSQLEPAPDLVVIGNALSRSNPAVEYVLNKGLPYVS 90

Query: 102 DIELFAWHV--DTPVIAITGSNGKSTVTDLSGVLANAAGVKAA--VGG---NIGVPALDL 154
             +  A HV     V+A  G++GK+T + +   +   AG+     +GG   N G+ A   
Sbjct: 91  GPQWLADHVLQGRWVLAAAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFGISARLG 150

Query: 155 ISPDVELYVLELSSFQLETTSSL---KLKAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDH 211
            +P   +   E  S   +  S     + + A   NL  DH D +  +     A  R F H
Sbjct: 151 GTPFFVVEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDL----AAIERQFHH 206

Query: 212 ------AETAVVNADDTQTFP---DHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARDEA 262
                 +E  V++ +  Q             V T G     Q  L    G  +    D A
Sbjct: 207 LVRTVPSEGLVIHPESEQALKRVIGMGCWTPVQTTGDGGQWQAKLLSADGSRFEVIFDGA 266

Query: 263 VMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQVVADNHGIKW 322
           V    E  L G+HNV N L  LA     GV  +   +AL  +  +  R + VA+ +G+  
Sbjct: 267 VQGVVEWELTGQHNVNNALATLAAARHVGVLPKQGAEALSEFRSVKRRMEKVAEVNGVTI 326

Query: 323 VND--SKATNVASTLAAL 338
            +D     T +A+TL  L
Sbjct: 327 YDDFAHHPTAIATTLDGL 344