Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (NCBI) from Rhodospirillum rubrum S1H

 Score = 70.9 bits (172), Expect = 9e-17
 Identities = 74/249 (29%), Positives = 108/249 (43%), Gaps = 45/249 (18%)

Query: 106 FAWHVDTPVIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP------ALDLISPD- 158
           FA      V+A+TG+NGK++    +  + +  G  AA  G +G        A  + +PD 
Sbjct: 104 FAGAQPATVVAVTGTNGKTSSVSFTRQIWDRLGRTAASLGTLGAESGVYRRAGSMTTPDP 163

Query: 159 --------------VELYVLELSSFQLET--TSSLKLKAAAFLNLSEDHMDRYQGMEDYR 202
                         V+   +E SS  L+      ++L AAAF NL+ DH+D +  M+ Y 
Sbjct: 164 VSLHKMLAEMTEAGVDALAMEASSHGLDQYRLDGVRLSAAAFTNLTRDHLDYHHTMDAYL 223

Query: 203 QAKLRIFDHA----ETAVVNADDTQTFPDHAAHLQ-----VVTFGVEQAAQFSLAQHQGR 253
            AK R+F         AV+NADD   FP  AA  +     V+ +G   A    LA    +
Sbjct: 224 AAKARLFGEVLGREGVAVLNADD-PAFPTLAALCRDRGQSVLDYG-RSAKTLRLAGVSAK 281

Query: 254 EY-------LFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTG 306
            +       LF R  +V+    L LVG     NVL  L L  + G     A+  L S  G
Sbjct: 282 AHGQSLDLELFGRHHSVL----LPLVGDFQAMNVLCALGLAIATGAPVDAAVATLASLEG 337

Query: 307 LTHRCQVVA 315
           +  R ++VA
Sbjct: 338 VPGRLEMVA 346