Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., UDP-N-acetylmuramoylalanine-D-glutamate ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  161 bits (408), Expect = 4e-44
 Identities = 132/394 (33%), Positives = 185/394 (46%), Gaps = 30/394 (7%)

Query: 76  VVTNPGIALATPEIQQVLAA----GIPVVGDIELFAW-HVDTPVIAITGSNGKSTVTDLS 130
           VV +PGI    P+   V       G+P+  DI+L A    D   + ITG+NGKST T L 
Sbjct: 77  VVWSPGIPHTFPQPHPVAVIAHERGVPLFCDIDLLARARQDCFFLGITGTNGKSTTTALI 136

Query: 131 GVLANAAGVKAAVGGNIGVPALDLIS-PDVELYVLELSSFQLETTSSLKLKAAAFLNLSE 189
           G +  AA     VGGN+G PAL     P    YVLELSS+QLE   SL    A  LN++ 
Sbjct: 137 GHILKAARHPVQVGGNLGTPALSFEPLPFHGTYVLELSSYQLELVPSLCCDVAVLLNITP 196

Query: 190 DHMDRYQGMEDYRQAKLRIF---DHAETAVVNADDTQTFPDHAAHLQ-----VVTFGVEQ 241
           DH+ R+ GM+ Y  AK +IF        AVV  DD  +   H A  +     VV      
Sbjct: 197 DHLARHGGMDGYIAAKRQIFRCGPRPGVAVVCIDDEPSLAIHDALCRENGRKVVAVSTRA 256

Query: 242 AAQFSLAQHQGREYLFARDEAVMACAELSLV----GRHNVANVLTVLALLDSAGVNFRLA 297
             +  +    G + + A      A A+L+ +    G HN  N     A     G++ ++ 
Sbjct: 257 LPRGGVGAVDG-QLVDATQGRPRAVADLTTIATLPGAHNWQNAAAAYAACRQHGIDAKII 315

Query: 298 LDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLVGGVGKG 357
           ++A+ S+ GL HR ++VA+  G++++NDSKATN     AA   L+    +Y + GG  K 
Sbjct: 316 VEAMASFPGLPHRQELVAEIDGVRFINDSKATNAD---AADKALRCYDTVYWIAGGQPKE 372

Query: 358 ADFTPLAPVLATLPVQLCCFGVDGHQF-------MPLHPSARFYDSMESIIRSIRPQLKS 410
                L P    +  Q    G     F       +PL        ++    ++       
Sbjct: 373 GGIVSLEPHFHRMR-QAYLIGQAAPAFERTLKGKVPLSQVGTLTRAVTEAAKAAWRDAIP 431

Query: 411 GDMVLLSPACASFDQFKNFMARGDIFAQLARQYA 444
           G +VLLSPACAS+DQF +F  RGDIF +L    A
Sbjct: 432 GAVVLLSPACASWDQFSSFEHRGDIFRELVADLA 465