Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI) from Rhodospirillum rubrum S1H

 Score = 67.8 bits (164), Expect = 7e-16
 Identities = 77/341 (22%), Positives = 137/341 (40%), Gaps = 40/341 (11%)

Query: 11  IQHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQE--QLSSDVALHRSGWNLE 68
           +  V + G+G++G++ V +   Y     VQ  D  +    +    L   +A+     NL 
Sbjct: 11  LHFVGIGGIGMSGIAEVLHNLGYR----VQGSDLSDNANVKRLRDLGIPIAIGHKAANLG 66

Query: 69  WLLNADLVVTNPGIALATPEIQQVLAAGIPVV------GDIELFAWHVDTPVIAITGSNG 122
              +A +VV +  +  + PE+    A  +PVV      G++    W      IA+ G++G
Sbjct: 67  ---DAQVVVISSAVKASNPEVMDARARFLPVVRRAEMLGELMRLKWS-----IAVAGTHG 118

Query: 123 KSTVTDLSGVLANAAGVKAAV--GGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLK 180
           K+T T L   L +AAG+   V  GG +     +      E  V+E       T + L   
Sbjct: 119 KTTTTSLVAQLLDAAGLDPTVINGGILNARGTNAYLGTGEWMVVEADESD-GTFTKLPAT 177

Query: 181 AAAFLNLSEDHMDRYQGMEDYRQAKLRIFDH------AETAVVNADDTQTFPDHAAHLQV 234
            +   N+  +H+D Y   +  R+A  R F H           ++  + Q         ++
Sbjct: 178 ISLVTNIDPEHLDFYGTFDKVREA-FRAFIHNLPFYGFACMCIDHPEVQAMIPQLQDRKI 236

Query: 235 VTFGVE-----QAAQFSLAQHQGREYLFARDEA-----VMACAELSLVGRHNVANVLTVL 284
           +T+G+      + A  +L     R  +   D A      +    L + GRHNV N L  +
Sbjct: 237 ITYGLSPQADIRGANVTLGPRGARFDVILTDRAGGGSRTIEGIRLPMYGRHNVLNALGAI 296

Query: 285 ALLDSAGVNFRLALDALKSYTGLTHRCQVVADNHGIKWVND 325
            +    G++  +  D L  + G+  R     D  G+  ++D
Sbjct: 297 GIAAEMGIDDAVIRDGLYHFEGVKRRFTRTGDAGGVTVIDD 337