Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase (RefSeq) from Shewanella loihica PV-4

 Score = 62.0 bits (149), Expect = 4e-14
 Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 32/312 (10%)

Query: 73  ADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTPV-IAITGSNGKSTVTDLSG 131
           A  ++    + +A P++  ++A     +G I         P  +A+TGSNGK++V ++  
Sbjct: 62  ASALLVERELPIAAPQL--IVANSQKAMGQIGAHVKQCVAPKSVALTGSNGKTSVKEMVA 119

Query: 132 VLANAAGVKAAVGGN----IGVP-ALDLISPDVELYVLELSSFQL----ETTSSLKLKAA 182
            + +         GN    +GVP  L  + P  E  V EL +  L     T+S ++   A
Sbjct: 120 TILSTQHQVLYTAGNFNNEVGVPLTLLRLEPQHEYGVFELGANHLGEINYTSSLVQPDVA 179

Query: 183 AFLNLSEDHMDRYQGMEDYRQAKLRIFDHAE---TAVVNADDTQTFPD-----HAAHLQV 234
              N++  H++ +  +E   +AK  IF H      AV+NADD   F D      A+H Q+
Sbjct: 180 MVNNVASAHLEGFGSLEGVAKAKSEIFLHLAKDGVAVINADD--AFADVMRRAAASHTQL 237

Query: 235 VTFGVEQAAQFSLAQHQG------REYLFARDEAVMACAELSLVGRHNVANVLTVLALLD 288
                   A  S  +         R  +   DE       L L GRH V+N L   ++  
Sbjct: 238 SFSSQGNPADVSADELSADALGCYRFRIAYLDE--QRTVSLPLSGRHQVSNALAATSICL 295

Query: 289 SAGVNFRLALDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGL-KIEGQL 347
           + G++    +  L     +  R Q       +  ++D+   N AS  AA+  L +IEG  
Sbjct: 296 ALGLSLDEIVQGLMRLQPVKGRMQPTRLGRFL-LIDDTYNANPASVGAAIDWLQEIEGNR 354

Query: 348 YLLVGGVGKGAD 359
            L++G +G+  D
Sbjct: 355 CLVLGDLGELGD 366