Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Shewanella loihica PV-4

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 47/282 (16%)

Query: 64  GWNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVD-TPVIAITGSNG 122
           G + + +  AD+VV +  I  + PEI       IP+V   E+ A  +     +A+ G++G
Sbjct: 72  GHSADQVEGADVVVVSTAIDASNPEILAAQERRIPIVRRAEMLAELMRYRHGVAVAGTHG 131

Query: 123 KSTVTDL---------------SGVLANAAGVKAAVGGNIGVPALDLISPDVELYVLELS 167
           K+T T L                G L N+AG  A +G +               Y++  +
Sbjct: 132 KTTTTSLIASVYGQAERDPTFVIGGLLNSAGTNARLGKS--------------RYLIAEA 177

Query: 168 SFQLETTSSLKLKAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAE------TAVVNADD 221
                +   L+   +   N+  DHMD Y+G  D+ + K    D          AV   DD
Sbjct: 178 DESDASFLHLQPMVSVVTNIEADHMDTYEG--DFEKLKSTFVDFLHNLPFYGVAVACIDD 235

Query: 222 ---TQTFPDHAAHLQVVTFGVEQAAQFSLA--QHQGREYLFARDEAVMACAEL--SLVGR 274
               +  P      +VVT+G  + A       + QG    F      MA  +L  +L GR
Sbjct: 236 PVVREILP--RIGRKVVTYGFSEDADVQALNFEQQGYSSRFTVRREGMADLDLRVNLPGR 293

Query: 275 HNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQVVAD 316
           HNV N L  +A+     +     + AL  + G+  R Q + +
Sbjct: 294 HNVLNALAAIAVATEDEIEDEAIIRALDEFQGIGRRFQQLGE 335