Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Dechlorosoma suillum PS

 Score =  260 bits (665), Expect = 5e-74
 Identities = 175/451 (38%), Positives = 242/451 (53%), Gaps = 29/451 (6%)

Query: 12  QHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVA---LHRSGWNLE 68
           +  VVVGLG +GL++  +L +      V+V D+R  PP  +   S V    L    +   
Sbjct: 6   KQAVVVGLGESGLAMAKWLAR--EGARVRVADSRALPPNADAFRSAVPSAELVTGPFQAA 63

Query: 69  WLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVD-----TPVIAITGSNGK 123
               AD +  +PG+ +   E    +A  +P+V +IELFAW +        VIAITGSNGK
Sbjct: 64  TFAGADFIAISPGVPV---EQVSAVAGAVPLVSEIELFAWALGRYSPAAKVIAITGSNGK 120

Query: 124 STVTDLSGVLANAAGVKAAVGGNIGVPALDLISPDVE------LYVLELSSFQLETTSSL 177
           +T T L+G L  AAG+   V GNI   ALD +   ++      L+VLELSSFQLETT SL
Sbjct: 121 TTTTALTGALGAAAGLNTRVAGNISPAALDALMDALDGNDLPQLWVLELSSFQLETTHSL 180

Query: 178 KLKAAAFLNLSEDHMDRYQG-MEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAHLQVVT 236
              AA  LN+SEDH+DRY G M+ Y +AK RIF      ++N DD ++          VT
Sbjct: 181 NADAATVLNVSEDHLDRYAGSMDRYTEAKARIFQGKGAMILNRDDDRSLGLGRCGRNFVT 240

Query: 237 FGVEQAAQFSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRL 296
           FG++Q  + +L        L   ++ ++A AE+ L G HN AN +  LALL++ GV    
Sbjct: 241 FGLDQPGR-ALDYGIADGCLMRGNDKLLALAEMQLTGLHNAANAMAALALLEAVGVAPAA 299

Query: 297 ALDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLVGGVGK 356
            L ALK++ GL HR + VA    + + +DSK TNV +TLAA+ GL     L +++GG GK
Sbjct: 300 VLPALKAFKGLPHRVEHVARIGAVDYYDDSKGTNVGATLAAIEGL--GRPLAIVLGGDGK 357

Query: 357 GADFTPLAPVLATLPVQLCCFGVDGHQFMPL-----HPSARFYDSMESIIRSIRPQLKSG 411
           G DF+PL   L      +   G DG            P+  F D M + +  +  Q K+G
Sbjct: 358 GQDFSPLKAALQQHGRAVALIGKDGPAIGQAIAGCGLPTESFAD-MAAAVAWLAAQAKAG 416

Query: 412 DMVLLSPACASFDQFKNFMARGDIFAQLARQ 442
           D VLLSPACAS D +KN+  R   F    +Q
Sbjct: 417 DAVLLSPACASLDMYKNYAHRAQAFIDAVQQ 447