Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., Probable UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD from Mycobacterium tuberculosis H37Rv

 Score =  168 bits (425), Expect = 4e-46
 Identities = 151/477 (31%), Positives = 219/477 (45%), Gaps = 54/477 (11%)

Query: 14  VVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSGWNLEWLLNA 73
           V+V G  +TG +V   L ++  + TV   D     P  E+    V+   S   ++ +   
Sbjct: 11  VLVAGGRVTGQAVAAVLTRFGATPTVCDDDPVMLRPHAERGLPTVS---SSDAVQQITGY 67

Query: 74  DLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTPV--------IAITGSNGKST 125
            LVV +PG + ATP +    AAG+P+ GD+EL AW +D           + +TG+NGK+T
Sbjct: 68  ALVVASPGFSPATPLLAAAAAAGVPIWGDVEL-AWRLDAAGCYGPPRSWLVVTGTNGKTT 126

Query: 126 VTDLSGVLANAAGVKAAVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAFL 185
            T +   +  A G +A + GNIG   LD++    EL  +ELSSFQL    SL+ +A A L
Sbjct: 127 TTSMLHAMLIAGGRRAVLCGNIGSAVLDVLDEPAELLAVELSSFQLHWAPSLRPEAGAVL 186

Query: 186 NLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQT---FPDHAAHLQV-VTFGVEQ 241
           N++EDH+D +  M +Y  AK R+      AV   DD++         A ++V    G   
Sbjct: 187 NIAEDHLDWHATMAEYTAAKARVLT-GGVAVAGLDDSRAAALLDGSPAQVRVGFRLGEPA 245

Query: 242 AAQFSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDAL 301
           A +  +      +  F+ D  ++  A + + G   V + L   AL  S GV      DA+
Sbjct: 246 ARELGVRDAHLVDRAFSDDLTLLPVASIPVPGPVGVLDALAAAALARSVGVPAGAIADAV 305

Query: 302 KSYTGLTHRCQVVADNHGIKWVNDSKATNV----ASTLA----------ALSGLKIEGQL 347
            S+    HR +VVA   GI +V+DSKATN     AS LA           L G  +  ++
Sbjct: 306 TSFRVGRHRAEVVAVADGITYVDDSKATNPHAARASVLAYPRVVWIAGGLLKGASLHAEV 365

Query: 348 YL----LVGGVGKGADFTPLAPVLA----TLPVQLCCFGVD-GHQFMPLHPSARFYD--- 395
                 LVG V  G D   +A  L+     +PV     G D G       P A   D   
Sbjct: 366 AAMASRLVGAVLIGRDRAAVAEALSRHAPDVPVVQVVAGEDTGMPATVEVPVACVLDVAK 425

Query: 396 -----------SMESIIRSIRPQLKSGDMVLLSPACASFDQFKNFMARGDIFAQLAR 441
                       M + + + R   + GD VLL+PA ASFDQF  +  RG+ FA   R
Sbjct: 426 DDKAGETVGAAVMTAAVAAARRMAQPGDTVLLAPAGASFDQFTGYADRGEAFATAVR 482