Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase from Marinobacter adhaerens HP15

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 81/332 (24%), Positives = 135/332 (40%), Gaps = 38/332 (11%)

Query: 38  TVQVIDTREAPPGQEQLSSDVALHRSGWNLEWLL-NADLVVTNPGIALATPEIQQVLAAG 96
           TV   D    PP   QL +       G++ + L    DLV+    ++   PE++ VL   
Sbjct: 26  TVTGSDQGVYPPMSTQLEAQGISLMEGYSPDHLEPKPDLVLIGNAMSRGNPEVEAVLNRN 85

Query: 97  IPVVGDIELFAWHV--DTPVIAITGSNGKSTVTDLSGVLANAAGVKAA--VGGNIGVPAL 152
           I  +   E  +  V     V+A+ G++GK+T T +   + + AG +    VGG   VP  
Sbjct: 86  IDYMSGPEWLSREVLRHRWVMAVAGTHGKTTTTSMLLWILDQAGFEPGYLVGG---VPRD 142

Query: 153 DLISPDV---ELYVLELSSFQLETTSSLKLKAAAFL----------NLSEDHMDRYQGME 199
             +S  +   + +V+E   +     S+   K + F+          NL  DH D ++ +E
Sbjct: 143 FPVSARLGNSDFFVIEADEYD----SAFFDKRSKFVHYRPHTLILNNLEFDHADIFENVE 198

Query: 200 DY-RQAKLRIFDHAETAVVNADDTQTFPDHAAHL------QVVTFGVEQAA----QFSLA 248
              RQ    +       ++         D+A  L      Q    G E       +  L 
Sbjct: 199 AIERQFHHLVRTVPSQGLIIRPAVDGHLDNALALGCWSPVQDTAIGSETPRMSDWRAELL 258

Query: 249 QHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLT 308
              G  +L    E  +A  +    G HNV N L+ +A     GV    A+ AL  ++G+ 
Sbjct: 259 SEDGSRFLVIHHEQPVATLKWDQTGLHNVRNALSAIAAARHVGVTPDHAVAALCRFSGVK 318

Query: 309 HRCQVVADNHGIKWVND--SKATNVASTLAAL 338
            R +++AD  G++  +D     T +A+TL  L
Sbjct: 319 RRMELLADIDGVRVYDDFAHHPTAIATTLEGL 350