Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase from Marinobacter adhaerens HP15

 Score = 64.3 bits (155), Expect = 8e-15
 Identities = 82/326 (25%), Positives = 134/326 (41%), Gaps = 33/326 (10%)

Query: 43  DTREAPPGQEQLSSDVALHRSGWNLEWLLN-------ADLVVTNPGIALATPEIQQVLAA 95
           DTR   PGQ      VAL    ++    L          LVV  P   LA P++  V+  
Sbjct: 34  DTRTLEPGQ----LFVALRGENFDGHRFLQQAMDKGAVGLVVDTPDTNLALPQL--VVNE 87

Query: 96  GIPVVGDIELFAWHVDTP-VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGN----IGVP 150
            +  +  +        T  ++AITGS+GK+TV ++   + +  G   +  GN    IGVP
Sbjct: 88  TLEALARLAAANREESTAAILAITGSSGKTTVKEMCAAILSQMGKTLSTKGNLNNHIGVP 147

Query: 151 -ALDLISPDVELYVLELSSFQL----ETTSSLKLKAAAFLNLSEDHMDRYQGMEDYRQAK 205
             L  +SP+ +  V+EL +  L     T +  K + A   N  E H++ +   E+   AK
Sbjct: 148 LTLFGLSPEHQYGVIELGASGLGEIAHTVALAKPRVAILTNAGEAHLEGFGSYENIVLAK 207

Query: 206 LRIFDHAET---AVVNADD-------TQTFPDHAAHLQVVTFGVEQAAQFSLAQHQGREY 255
             I D   +    V+N DD       ++      A +  +    +  A         R +
Sbjct: 208 GEIIDGVASDGLMVLNGDDPAFAQWRSRAGARRVAGVSRLGAEADYHAVIDGQDAGTRTF 267

Query: 256 LFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQVVA 315
             +  +  +    L L G HN+ N+L  +A     G + +  +  L S   +  R QV+ 
Sbjct: 268 QVSGPDGWLCRVTLGLEGDHNITNMLLAIAATRELGASDQAIVAGLASVAPVKGRLQVLE 327

Query: 316 DNHGIKWVNDSKATNVASTLAALSGL 341
            +  +  ++DS   N +S  AAL  L
Sbjct: 328 LSPEMTLIDDSYNANPSSMKAALGVL 353