Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 70/257 (27%), Positives = 105/257 (40%), Gaps = 23/257 (8%)

Query: 73  ADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVD-TPVIAITGSNGKSTVTDLSG 131
           AD+VV +  I    PEI       IP+V   E+ A  +     +AI G++GK+T T L  
Sbjct: 80  ADVVVVSTAINPQNPEIIAAKELRIPIVRRAEMLAELMRYRHGVAIAGTHGKTTTTSLIA 139

Query: 132 VLANAAG--VKAAVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAFLNLSE 189
            L   AG      +GG +     +        Y++  +     +   L+   +   N+  
Sbjct: 140 SLYGQAGRDPTFVIGGLLNSAGTN-ARLGTSRYLIAEADESDASFLHLQPMVSVVTNIEA 198

Query: 190 DHMDRYQGMEDYRQAKLRIFDHAE------TAVVNADD---TQTFPDHAAHLQVVTFGVE 240
           DHMD Y G  D+ + K    D          AVV  DD    +  P  + H  +VT+G  
Sbjct: 199 DHMDTYGG--DFEKLKSTFVDFLHNLPFYGVAVVCIDDPVVREIMPRISRH--IVTYGFR 254

Query: 241 -----QAAQFSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFR 295
                QA  FS   HQ R +   R         L+L G+HNV N L  +A+     ++  
Sbjct: 255 DDADVQALNFSQQGHQCR-FTVRRKGKEDLDLLLNLPGQHNVLNALAAIAVATEDEIDDS 313

Query: 296 LALDALKSYTGLTHRCQ 312
             + AL  + G+  R Q
Sbjct: 314 AIIQALAEFQGIGRRFQ 330