Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  171 bits (434), Expect = 3e-47
 Identities = 135/452 (29%), Positives = 212/452 (46%), Gaps = 43/452 (9%)

Query: 1   MSISMDRWQGIQH---VVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPP--GQEQLS 55
           M+   ++ +GI+     VVVG G +G++    L      V V   D    P    +    
Sbjct: 1   MTCDKEKTRGIRPGDIAVVVGTGRSGVAAARLLHAKGARVRVLERDAANVPATFAEWAAG 60

Query: 56  SDVALHRSGWNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHV--DTP 113
           + V +     +     +A +VV +PG+A+AT         G  V+ ++EL AW      P
Sbjct: 61  AGVEIVCGAHDAAHFADAAVVVPSPGVAVATLRPYLPATGGPEVMAEMEL-AWRELSGEP 119

Query: 114 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVPALDLI--SPDVELYVLELSSFQL 171
           VIA+TG++GK+T   L   +    G+   +GGNIG P  + +      ++ V+E+SSFQL
Sbjct: 120 VIAVTGTSGKTTTVSLCAHMLRTQGLSVFLGGNIGTPLCEYVLEGKRADVLVIEISSFQL 179

Query: 172 ETTSSLKLKAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAH 231
           +T S+ + + A  LN++ +H+D +  M++Y  AK R+F        + DD   F +  A 
Sbjct: 180 QTCSTFRPRVAMLLNITANHLDYHADMQEYIDAKFRLF-----RCQDEDDLAVFGEGLAP 234

Query: 232 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAG 291
           L V  +GV+            R   F    A    AE  L G HN AN           G
Sbjct: 235 L-VDRYGVK-----------ARRVTF---RATDRFAESRLFGAHNRANAEAAWTAAREFG 279

Query: 292 VNFRLALDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLV 351
           V    AL A+ ++  + HR + VA+  G+ +VNDSK T V++   AL     +  + LL 
Sbjct: 280 VTLENALQAVATFAPMPHRLEQVAERGGVLYVNDSKCTTVSALRVALEA--FDRPVLLLA 337

Query: 352 GGVGKGADFTPLAPVLATLPVQLCCFGVDGHQF-------MPLHPSARFYDSMESIIRSI 404
           GG  KG D   L P++      +  FG     F       +P+   A    ++E  +R  
Sbjct: 338 GGKFKGGDLEGLIPLVRERVRAVMLFGASREVFEAAWRDVVPMTWDA----TLEEAVRRA 393

Query: 405 RPQLKSGDMVLLSPACASFDQFKNFMARGDIF 436
               + G++VL++PA ASFD F+N+  RGD+F
Sbjct: 394 ASAARQGEVVLMAPATASFDLFRNYGHRGDVF 425