Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 69/286 (24%), Positives = 116/286 (40%), Gaps = 39/286 (13%)

Query: 108 WHVDTP--VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVPA-------------- 151
           W+   P  ++ +TG+NGK++V   +  L    G  AA  G  G+                
Sbjct: 101 WYGAQPATMVGVTGTNGKTSVASFTRQLWQGLGHAAANIGTTGIEGDFSADLAHTTPDPL 160

Query: 152 ------LDLISPDVELYVLELSSFQLETT--SSLKLKAAAFLNLSEDHMDRYQGMEDYRQ 203
                  ++ +  +    +E SS  L+      ++L AA F N S+DH+D ++  E Y  
Sbjct: 161 TLHAALAEMAAQGITHAAMEASSHGLDQRRLDGVRLVAAGFTNFSQDHLDYHETFEAYFA 220

Query: 204 AKLRIFDHA----ETAVVNADDTQTFP----DHAAHLQVVTFGVEQAAQFSLAQHQ---- 251
           AK  +F         AV+N DD +        H A  +++T G  + A   L   +    
Sbjct: 221 AKAGLFSRVLADQGMAVINLDDPKGADMMAIAHGAGAELLTVGTHKDAMLRLTAQRFDAD 280

Query: 252 GREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRC 311
           G+E  F   + V   A L+LVG    +NVL  + L+ + G      +  L     +  R 
Sbjct: 281 GQEMRFTW-KGVAHQARLNLVGGFQASNVLVAMGLVMATGAQVGDLVPLLPRLATVRGRM 339

Query: 312 QVVA--DNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLVGGVG 355
           Q VA  +N    +V+ +   +   T        + G+L ++ G  G
Sbjct: 340 QKVARRENGATVFVDYAHTPDALKTALRALRPHVLGRLVVVFGAGG 385