Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 80/324 (24%), Positives = 136/324 (41%), Gaps = 24/324 (7%)

Query: 18  GLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQ--EQLSSDVALHRSGWNLEWLLNADL 75
           G+G++G++ V     Y    TVQ  D + +   +  E+L + + + + G NL    +A++
Sbjct: 27  GIGMSGIAEVLLTHGY----TVQGSDLKPSKITERLERLGAKIFIGQVGENLA---DAEV 79

Query: 76  VVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTPV-IAITGSNGKSTVTDLSGVLA 134
           VV +  I    PE++   A G+PVV   E+ A  +     IAI G++GK+T T +   L 
Sbjct: 80  VVISSAIKPGNPELETARARGLPVVRRAEMLAELMRLKSNIAIAGTHGKTTTTTMVATLL 139

Query: 135 NAAGVKAAV--GGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAFLNLSEDHM 192
           +  G+   V  GG I     +  +   E  V+E       T + L    A   N+  +HM
Sbjct: 140 DRGGIDPTVINGGIIHAYDSNARAGAGEWMVVEADESD-GTFNRLPATIAVVTNIDPEHM 198

Query: 193 DRYQGMEDYRQAKLRI-----FDHAETAVVNADDTQTFPDHAAHLQVVTFGVEQAAQ--- 244
           + +   E  +           F        +  + Q         +VVTFG    A    
Sbjct: 199 EHWGSFERLKDGFHEFVSNIPFYGLAVCCTDHPEVQALVGRITDRRVVTFGFNTQADVRA 258

Query: 245 FSLAQHQG---REYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDAL 301
            +L    G    + L   +  V++   L + G HNV+N L  +A+    G+       AL
Sbjct: 259 VNLTYKSGVAHFDILLRNEGQVISGCTLPMPGDHNVSNALAAVAVARHLGMKRDEIRAAL 318

Query: 302 KSYTGLTHRCQVVADNHGIKWVND 325
             + G+  R   VA+  G+  ++D
Sbjct: 319 AGFAGVNRRFTKVAELGGVTIIDD 342