Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase from Paraburkholderia bryophila 376MFSha3.1

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 94/421 (22%), Positives = 160/421 (38%), Gaps = 47/421 (11%)

Query: 38  TVQVIDTREAPPGQEQLSSDVALHRSGWNLEWL--LNADLVVTNPGIALATPEIQQVLAA 95
           TV   D    PP   QL +       G++ + L  LNADL V    ++   P ++ +L  
Sbjct: 26  TVTGCDAGVYPPMSTQLEAQGIRLIEGYDADQLNGLNADLFVIGNVVSRGNPLMEAILDR 85

Query: 96  GIPVVGDIELFAWHV--DTPVIAITGSNGKSTVTDLSGVLANAAGVKAA--VGG---NIG 148
           G+P V   +    HV     V+A+ G++GK+T + +   L   AG+     +GG   N G
Sbjct: 86  GLPYVSGPQWLGEHVLNGKWVLAVAGTHGKTTTSSMLTWLLEDAGLNPGFLIGGVPLNFG 145

Query: 149 VPALDLISPDVELYVLELSSFQLETTSS------LKLKAAAFLNLSEDHMDRY---QGME 199
           V A      D   +V+E   +              + K A   NL  DH D +     +E
Sbjct: 146 VSAR---LTDSSFFVIEADEYDTAFFDKRSKFVHYRPKTAVLNNLEFDHADIFPDLAAIE 202

Query: 200 DYRQAKLRIFDHAETAVVNA--DDTQTFPDHAAHLQVVTFGVEQAAQFSLAQHQG----R 253
                 +R        V N   D  +         +V  FGV Q    +L    G     
Sbjct: 203 TQFHHLIRTVPRIGRVVTNGREDPLERVLTRGCWSEVERFGV-QGGWETLPAEDGVPVDE 261

Query: 254 EYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQV 313
            +    +   +   E  + G HN  N L  +A     GV    A  +L S+  +  R +V
Sbjct: 262 RFAVYHNAERVGVVEWQVQGEHNRMNALAAIAAARHVGVPPAQAAKSLSSFRNVKRRMEV 321

Query: 314 VADNHGIKWVND--SKATNVASTLAALSGLKIEGQLYLLVGGVGKGADFTPLAPVLATLP 371
                G+   +D     T + +T+A L   ++      ++  +   ++   L  + A LP
Sbjct: 322 RGSVDGVTVYDDFAHHPTAIDTTVAGLRA-RVGRDNTRILAVLEPRSNTMKLGVMKAQLP 380

Query: 372 VQLC----CFGVD------------GHQFMPLHPSARFYDSMESIIRSIRPQLKSGDMVL 415
             L      FG              G    PL   A+ +D+++++++++    + GD +L
Sbjct: 381 ASLADADLVFGYGAPSGRDALGWNLGEALAPLGGKAQAFDNLDALVKAVVHAARPGDQIL 440

Query: 416 L 416
           +
Sbjct: 441 V 441