Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Shewanella sp. ANA-3

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 68/257 (26%), Positives = 103/257 (40%), Gaps = 23/257 (8%)

Query: 73  ADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVD-TPVIAITGSNGKSTVTDLSG 131
           AD+VV +  I    PEI       IP+V   E+ A  +     +AI G++GK+T T L  
Sbjct: 80  ADVVVVSTAINPENPEIIAAKELRIPIVRRAEMLAELMRYRHGVAIAGTHGKTTTTSLIA 139

Query: 132 VLANAAG--VKAAVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAFLNLSE 189
            L   AG      +GG +     +        Y++  +     +   L+   +   N+  
Sbjct: 140 SLYGQAGRDPTFVIGGLLNSAGTN-ARLGTSRYLIAEADESDASFLHLQPMVSVVTNIEA 198

Query: 190 DHMDRYQGMEDYRQAKLRIFDHAE------TAVVNADDT---QTFPDHAAHLQVVTFGVE 240
           DHMD Y G  D+ + K    D          AVV  DD    +  P    H+  +T+G  
Sbjct: 199 DHMDTYGG--DFEKLKSTFVDFLHNLPFYGVAVVCIDDAVVREIMPRIGRHM--ITYGFS 254

Query: 241 -----QAAQFSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFR 295
                QA  F    HQ R +   R         L+L G+HNV N L  +A+     ++  
Sbjct: 255 DDADVQALNFHQQGHQCR-FTVRRKGKEDLDLLLNLPGQHNVLNALAAIAVATEDEIDDS 313

Query: 296 LALDALKSYTGLTHRCQ 312
             + AL  + G+  R Q
Sbjct: 314 AIIQALAEFQGIGRRFQ 330