Pairwise Alignments

Query, 398 a.a., cell division protein FtsW from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., rod shape-determining protein RodA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  172 bits (436), Expect = 1e-47
 Identities = 112/369 (30%), Positives = 192/369 (52%), Gaps = 14/369 (3%)

Query: 25  RQLVWIAFGL---MLIGLVMVTSASFPISSRLTDQPFHFMFRHAIFLLLAFLTSSMVLQV 81
           RQ +W    +   +L+GL+ V      +    + +    M R    + L+      + Q+
Sbjct: 11  RQNIWQRLHIDLPLLLGLLAVMGFGLFVIYSASGEDLGMMERQLFRMFLSICVMFTMAQI 70

Query: 82  PLDRWMKYSSLLLGISFFLLIVVLVVGKSVNGASRWIPLGLFNLQPAEVAKLSLFIFMSG 141
             +   +++  +      LL+ V   G+   GA RW+ LG    QP+E+ KL+  I M+ 
Sbjct: 71  NPEALKRWALPIYLAGVVLLLAVHFFGEINKGAQRWLNLGFMEFQPSELIKLAFPITMAW 130

Query: 142 YLVRKHDEVRQTFFGGFLKPIMVFGTLAVLLLGQPDLGTVIVMLVTLFGMLFIAG---AK 198
           Y+ +     ++ +  G    I++  TL  L+  QPDLGT I++  +   +LF++G   A 
Sbjct: 131 YISKFPLPPKKRYLAG-AGVILLIPTL--LIAKQPDLGTSILVAASGIFVLFLSGMSWAI 187

Query: 199 LSQFLALMVAGVLAVVALIVAEPYRVRRVTSFLDPWEDPFGSGYQLTQSLMAFGRGEWFG 258
           +  F+A ++A  L ++   +   Y+  RV + LDP +DP G+GY + QS +A G G  +G
Sbjct: 188 VGGFIAAVLA-FLPILWYFLMHDYQRTRVLTLLDPEQDPLGAGYHIIQSKIAIGSGGLWG 246

Query: 259 QG-LGNSIQKLEYLPEAHTDFVFAVLAEELGFIGVVLVLVLIFSLVLKAIFIGKKAFQHD 317
           +G L  +  +LE++PE HTDF+FAV+ EE G IG +++L++   ++ + + I   A    
Sbjct: 247 KGWLDGTQSQLEFIPERHTDFIFAVIGEEFGLIGSIILLLMYLYIIGRGLVIASNA---Q 303

Query: 318 QQFGGYLAFGIGIWFAFQTLVNVGAAAGMVPTKGLTLPLISYGGSSLIIMSVAVSILLRI 377
             F   LA  I + F     VN+G  +G++P  G+ LPL+SYGG+S++ +     IL+ I
Sbjct: 304 TSFARLLAGSITLTFFVYVFVNIGMVSGILPVVGVPLPLVSYGGTSMLTLMTGFGILMSI 363

Query: 378 DHECRLADR 386
               R  DR
Sbjct: 364 HTHRRFVDR 372