Pairwise Alignments

Query, 398 a.a., cell division protein FtsW from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., rod shape-determining protein rodA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  103 bits (258), Expect = 8e-27
 Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 4/162 (2%)

Query: 218 VAEPYRVRRVTSFLDPWEDPFGSGYQLTQSLMAFGRGEWFGQGLGNSIQ-KLEYLPEAHT 276
           + E ++  R+   L   ED  G+GY + QS +A G G   G+G  N  Q KL+Y+PE  T
Sbjct: 320 ILESHQQIRIKVVLGMEEDLTGAGYNVNQSKIAIGSGGLTGKGFLNGTQTKLKYVPEQDT 379

Query: 277 DFVFAVLAEELGFIGVVLVLVLIFSLVLKAIFIGKKAFQHDQQFGGYLAFGIGIWFAFQT 336
           DF+F  + EE GF+G   VL+    L+L+ I + ++      +  GY    I   F F  
Sbjct: 380 DFIFCTVGEEQGFVGSAAVLLAFLILILRLIALSERQTSIFARVYGYSVVSI---FLFHL 436

Query: 337 LVNVGAAAGMVPTKGLTLPLISYGGSSLIIMSVAVSILLRID 378
            +NVG   G+ P  G+ LP  SYGGSSL   ++ + I LR+D
Sbjct: 437 FINVGMVLGLTPVIGIPLPFFSYGGSSLWGFTILLFIFLRLD 478



 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 21/239 (8%)

Query: 25  RQLVWIAFGLMLI----GLVMVTSASFPISSRLTDQPFHFMFRHA---IFLLLAFLTSSM 77
           + L W+  G+ L+    G   V  AS+    R     F F  R     ++++ +F    +
Sbjct: 10  KTLDWVTIGIYLLLIVGGWFSVCGASYDYGDR---DFFDFSTRAGKQFVWIICSFGLGFV 66

Query: 78  VLQVPLDRWMKYSSLLLGISFFLLIVVLVVGKSVNGASRWIPLGLFNLQPAEVAKLSLFI 137
           +L +    +  ++ ++      LLIV + +     G+  W+ +G  +LQPAE AK +  +
Sbjct: 67  LLMLEDRMYDMFAYIIYVGMIVLLIVTIFIAPDTKGSRSWLVMGPVSLQPAEFAKFATAL 126

Query: 138 FMSGYLVRKHDEVRQTFFGGFLKPIMVFGTLAVLLLGQPDLGTVIVMLVTLFGMLFIAGA 197
            ++ Y+      +++      L  I++   L  L++GQ + G+ +V L   F +L+  G 
Sbjct: 127 ALAKYMNSYSFSIKKEKCAFVLGFIILLPML--LIIGQRETGSALVYL-AFFLVLYREGM 183

Query: 198 KLSQFLALMVAGVLAVVALIVAEPYRVRRVTSFLDPWEDPFGSGYQLTQSLMAFGRGEW 256
                  ++ AG+ AV+  +V     +R    F+     P G    L   L+  G   W
Sbjct: 184 P----GVVLFAGLCAVIYFVVG----IRFDEVFIADTPTPLGEFIVLLLILLFAGGMVW 234