Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  147 bits (371), Expect = 7e-40
 Identities = 104/368 (28%), Positives = 187/368 (50%), Gaps = 24/368 (6%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNVAH 81
           IH +GI G  M  +A +    G+ ++GSD  AN    ++ +L  +G  +  G++   +  
Sbjct: 3   IHILGICGTFMGSMAVLAKELGHHVTGSD--ANVYPPMSTQLEAQGIELTQGYDPAQLDP 60

Query: 82  A-SVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTTTAL 139
           A  +VV+  A++  NP ++    K +P V   + LA+ +++ R  +AVAGTHGKTTT+++
Sbjct: 61  APDLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTSSM 120

Query: 140 VTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDAS-------FLHLQPMV 192
           +  +   AG+ P F+ GG+ ++   +ARLG +   + EADE D++       F+H +P  
Sbjct: 121 LAWVLEHAGMSPGFLIGGVPQNFSVSARLGGTPFFVIEADEYDSAFFDKRSKFVHYRPRT 180

Query: 193 TIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR-VSRQVI 251
            I+ N+E DH D +  D   +++ F   +  +P  G  I    +P ++ +I       V 
Sbjct: 181 AILNNLEYDHADIF-PDLPAIERQFHHLVRTIPSEGLVIHPTTEPALQRVIEMGCWTPVQ 239

Query: 252 TYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVATEDD 311
           T G      V++   + +G   QF V+ +G +   +  ++ G+HN  NA A +A A    
Sbjct: 240 TTGAGGQWQVKL--LKDDG--SQFEVMFEGVSQGVVEWDMTGQHNVANALATLAAARHVG 295

Query: 312 IRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEK 371
           +     + A++  +   RR + + E    NG+  + DD+ HHPT +  T+   R    + 
Sbjct: 296 VVPSMGIAALSAFKSVKRRMEKVAEV---NGIT-IYDDFAHHPTAIATTLDGLRKRIGDA 351

Query: 372 RLVMIFQP 379
            L+ I +P
Sbjct: 352 PLIAIIEP 359